RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
TPM3-206ENST00000330188 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 PRR25Q96S07 402 aa11.29□□□□□ -0.6
TPM3-206ENST00000330188 A0A1B0GW15 77 aa11.28□□□□□ -0.6
TPM3-206ENST00000330188 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
TPM3-206ENST00000330188 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
TPM3-206ENST00000330188 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
TPM3-206ENST00000330188 VGLL1Q99990 258 aa11.28□□□□□ -0.6
TPM3-206ENST00000330188 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
TPM3-206ENST00000330188 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
TPM3-206ENST00000330188 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.6
TPM3-206ENST00000330188 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.6
TPM3-206ENST00000330188 FBLL1A6NHQ2 334 aaKnown RBP11.27□□□□□ -0.6
TPM3-206ENST00000330188 BUB3O43684 328 aa11.27□□□□□ -0.6
TPM3-206ENST00000330188 LINC00614P0C842 121 aa11.27□□□□□ -0.6
TPM3-206ENST00000330188 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.6
TPM3-206ENST00000330188 TMEM219Q86XT9 240 aa11.27□□□□□ -0.6
TPM3-206ENST00000330188 A0A087X0K7 114 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 TMEM189A5PLL7 270 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 GOSR1O95249 250 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
TPM3-206ENST00000330188 ATOH7Q8N100 152 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 Q8TAT8 98 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 AKAP6Q13023 2319 aa11.27□□□□□ -0.61
TPM3-206ENST00000330188 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 IGHV1-69DA0A0B4J2H0 117 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 IGHV1-69P01742 117 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 RAB9AP51151 201 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 EEF1AKMT3Q96AZ1 226 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 IGLC3P0DOY3 106 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 PIMREGQ9BSJ6 248 aa11.26□□□□□ -0.61
TPM3-206ENST00000330188 ZFHX3Q15911 3703 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 TRBV7-1A0A0A6YYK4 115 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 ZNF80P51504 273 aaPredicted RBP11.25□□□□□ -0.61
TPM3-206ENST00000330188 ZNF138P52744 262 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 MAJINQ3KP22 176 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 CCL19Q99731 98 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
TPM3-206ENST00000330188 M0QZK8 103 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 BRD3OSQ6XYD6 125 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 LINC00173Q6ZV60 143 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 TRAV40A0A0B4J280 105 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 C10orf105Q8TEF2 133 aa11.24□□□□□ -0.61
TPM3-206ENST00000330188 TRAV41A0A0B4J266 112 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 PRAC2D3DTV9 90 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
TPM3-206ENST00000330188 CRIP2P52943 208 aaPredicted RBP11.23□□□□□ -0.61
TPM3-206ENST00000330188 SSTP61278 116 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 UQCR10Q9UDW1 63 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 CSN3P07498 182 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 BMI1P35226 326 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 ERCC8Q13216 396 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 ZNF575Q86XF7 245 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 RNF182Q8N6D2 247 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 KLHDC1Q8N7A1 406 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 MEGF9Q9H1U4 602 aa11.23□□□□□ -0.61
TPM3-206ENST00000330188 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
TPM3-206ENST00000330188 CYB5R2Q6BCY4 276 aa11.22□□□□□ -0.61
TPM3-206ENST00000330188 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
TPM3-206ENST00000330188 LINC00527Q9UJ94 153 aa11.22□□□□□ -0.61
TPM3-206ENST00000330188 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.61
TPM3-206ENST00000330188 OR5AL1P0C617 328 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 SRSF2Q01130 221 aaKnown RBP11.21□□□□□ -0.61
TPM3-206ENST00000330188 PSMG3-AS1Q96PY0 264 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 METTL26Q96S19 204 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 U3KQE9 123 aa11.21□□□□□ -0.61
TPM3-206ENST00000330188 RBAKDNA6NC62 111 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 FAM223BA6NKX1 122 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 NDUFS8O00217 210 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 IGLC6P0CF74 106 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 FAM223AQ8IWN6 122 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 VPS13CQ709C8 3753 aa11.21□□□□□ -0.62
TPM3-206ENST00000330188 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 CLEC2AQ6UVW9 174 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 AMN1Q8IY45 258 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 FER1L6-AS1Q8NA97 138 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms