RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 NUDT3O95989 172 aa12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 S100A11P31949 105 aa12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 RPL29P47914 159 aaKnown RBP12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 ZNF503Q96F45 646 aa12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 C11orf1Q9H5F2 150 aa12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 NOP10Q9NPE3 64 aaKnown RBP12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 LSM5Q9Y4Y9 91 aaKnown RBP12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 MUC4Q99102 2169 aa12.4□□□□□ -0.42
PTPMT1-201ENST00000326656 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 C5orf51A6NDU8 294 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 FAM25EA8MYX2 175 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 H3BQ15 152 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 CCSO14618 274 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 SULT1A1P50225 295 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 NUDT15Q9NV35 164 aa12.39□□□□□ -0.43
PTPMT1-201ENST00000326656 PRAC2D3DTV9 90 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 SLC17A3O00476 420 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 CST7O76096 145 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 LEPP41159 167 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 HBG1P69891 147 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 HBG2P69892 147 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 LYRM2Q9NU23 88 aaPredicted RBP12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 DYNC1H1Q14204 4646 aaKnown RBP12.38□□□□□ -0.43
PTPMT1-201ENST00000326656 TRAV6A0A075B6T7 132 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 FAM24AA6NFZ4 105 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 NPIPB6E9PJ23 425 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 H3BNG1 76 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 SNRPCP09234 159 aaKnown RBP12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 IL15RAQ13261 267 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 CLINT1Q14677 625 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 LINC00299Q6ZSB3 139 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 STX12Q86Y82 276 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 RNF141Q8WVD5 230 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 PYGO2Q9BRQ0 406 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 CCDC32Q9BV29 185 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 SLC39A9Q9NUM3 307 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 TMEM14CQ9P0S9 112 aa12.37□□□□□ -0.43
PTPMT1-201ENST00000326656 MPDU1O75352 247 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 H2AFB2P0C5Z0 115 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 CT45A10P0DMU9 189 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 M6PRP20645 277 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 DAZ2Q13117 558 aaKnown RBP12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 SEC22CQ9BRL7 303 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 PRELID1Q9Y255 219 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
PTPMT1-201ENST00000326656 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 SNURFLB1AK76 121 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 H3BTX0 84 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 RLN2P04090 185 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 PDE6HQ13956 83 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 KIR3DS1Q14943 382 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 TMEM252Q8N6L7 170 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 RXFP4Q8TDU9 374 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 GNPNAT1Q96EK6 184 aaPredicted RBP12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 ZNF586Q9NXT0 402 aa12.35□□□□□ -0.43
PTPMT1-201ENST00000326656 TRBV19A0A075B6N1 114 aa12.34□□□□□ -0.43
PTPMT1-201ENST00000326656 HIST1H1EP10412 219 aaKnown RBP12.34□□□□□ -0.43
PTPMT1-201ENST00000326656 OR5I1Q13606 314 aa12.34□□□□□ -0.43
PTPMT1-201ENST00000326656 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
PTPMT1-201ENST00000326656 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 FAM240BA0A1B0GVZ2 78 aa12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 S100A10P60903 97 aa12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 BAXQ07812 192 aa12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 PARD6GQ9BYG4 376 aaPredicted RBP12.33□□□□□ -0.44
PTPMT1-201ENST00000326656 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 IGSF23A1L1A6 192 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 NMBP08949 121 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 PRB4P10163 310 aaPredicted RBP12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 BTF3P20290 206 aaKnown RBP12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 RAB32Q13637 225 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 MZT2BQ6NZ67 158 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 ZNF680Q8NEM1 530 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 Q9H8V8 135 aa12.32□□□□□ -0.44
PTPMT1-201ENST00000326656 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 GAGE7O76087 117 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 FGF7P21781 194 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 TNP2Q05952 138 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 UPK3BQ9BT76 320 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 TIMM9Q9Y5J7 89 aa12.31□□□□□ -0.44
PTPMT1-201ENST00000326656 KLLNB2CW77 178 aa12.3□□□□□ -0.44
PTPMT1-201ENST00000326656 NDUFB4O95168 129 aa12.3□□□□□ -0.44
PTPMT1-201ENST00000326656 HOXA5P20719 270 aa12.3□□□□□ -0.44
PTPMT1-201ENST00000326656 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
PTPMT1-201ENST00000326656 ZNF575Q86XF7 245 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms