RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 IGHG4P01861 327 aa16.8■□□□□ 0.28
SPHK1-201ENST00000323374 APOHP02749 345 aaPredicted RBP16.8■□□□□ 0.28
SPHK1-201ENST00000323374 TRGV3P03979 118 aa16.8■□□□□ 0.28
SPHK1-201ENST00000323374 ZNF705DP0CH99 300 aaPredicted RBP16.8■□□□□ 0.28
SPHK1-201ENST00000323374 ZNF705BP0CI00 300 aaPredicted RBP16.8■□□□□ 0.28
SPHK1-201ENST00000323374 C1orf194Q5T5A4 169 aa16.8■□□□□ 0.28
SPHK1-201ENST00000323374 COX8CQ7Z4L0 72 aa16.8■□□□□ 0.28
SPHK1-201ENST00000323374 LURAP1LQ8IV03 231 aa16.8■□□□□ 0.28
SPHK1-201ENST00000323374 M0QZK8 103 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 SLC25A16P16260 332 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 IGFL4Q6B9Z1 124 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 NRN1Q9NPD7 142 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 USP9XQ93008 2570 aaPredicted RBP16.79■□□□□ 0.28
SPHK1-201ENST00000323374 A0A1B0GUT8 65 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 GATA3P23771 443 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 Q6AWC8 147 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 BBC3Q96PG8 261 aaPredicted RBP16.79■□□□□ 0.28
SPHK1-201ENST00000323374 PRR25Q96S07 402 aa16.79■□□□□ 0.28
SPHK1-201ENST00000323374 IGHG2P01859 326 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 HLA-DMBP28068 263 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 LCN12Q6JVE5 192 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 FLNCQ14315 2725 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 IGHV3-66A0A0C4DH42 116 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 COX6B1P14854 86 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 FAM162BQ5T6X4 162 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.78■□□□□ 0.28
SPHK1-201ENST00000323374 RIGQ13278 110 aa16.77■□□□□ 0.28
SPHK1-201ENST00000323374 PRR31Q5SQ13 230 aa16.77■□□□□ 0.28
SPHK1-201ENST00000323374 VGLL1Q99990 258 aa16.77■□□□□ 0.28
SPHK1-201ENST00000323374 SLC50A1Q9BRV3 221 aa16.77■□□□□ 0.28
SPHK1-201ENST00000323374 H3BUA1 57 aa16.76■□□□□ 0.27
SPHK1-201ENST00000323374 SH2D1AO60880 128 aa16.76■□□□□ 0.27
SPHK1-201ENST00000323374 AVPP01185 164 aa16.76■□□□□ 0.27
SPHK1-201ENST00000323374 FAM19A2Q8N3H0 131 aa16.76■□□□□ 0.27
SPHK1-201ENST00000323374 A0A1B0GW15 77 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 TMEM189A5PLL7 270 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 HSBP1O75506 76 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 BRI3O95415 125 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 ARMS2P0C7Q2 107 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 KRTDAPP60985 99 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 ZMAT5Q9UDW3 170 aaKnown RBP16.75■□□□□ 0.27
SPHK1-201ENST00000323374 U3KQE9 123 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 ZFHX3Q15911 3703 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 IGHV3OR16-13A0A075B7E8 117 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 LOC102724200A0A096LPH7 203 aaPredicted RBP16.75■□□□□ 0.27
SPHK1-201ENST00000323374 IGHV3-74A0A0B4J1X5 117 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 ZNF207O43670 478 aaKnown RBP16.75■□□□□ 0.27
SPHK1-201ENST00000323374 NTF3P20783 257 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 PPIFP30405 207 aaKnown RBP16.75■□□□□ 0.27
SPHK1-201ENST00000323374 ARL3P36405 182 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 Q8TAT8 98 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 BORCS7Q96B45 105 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 C14orf144Q96I85 54 aa16.75■□□□□ 0.27
SPHK1-201ENST00000323374 SPG11Q96JI7 2443 aa16.74■□□□□ 0.27
SPHK1-201ENST00000323374 TEX43Q6ZNM6 134 aa16.74■□□□□ 0.27
SPHK1-201ENST00000323374 REC114Q7Z4M0 266 aa16.74■□□□□ 0.27
SPHK1-201ENST00000323374 NIT1Q86X76 327 aa16.74■□□□□ 0.27
SPHK1-201ENST00000323374 NDFIP1Q9BT67 221 aa16.74■□□□□ 0.27
SPHK1-201ENST00000323374 RNF114Q9Y508 228 aa16.74■□□□□ 0.27
SPHK1-201ENST00000323374 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.73■□□□□ 0.27
SPHK1-201ENST00000323374 BMI1P35226 326 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 RNASEKQ6P5S7 137 aaKnown RBP16.73■□□□□ 0.27
SPHK1-201ENST00000323374 ZNF843Q8N446 348 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 LINC01356Q8N9X3 169 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 USMG5Q96IX5 58 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 TPPP3Q9BW30 176 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 IGHV3-49A0A0A0MS15 119 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 BLCAPP62952 87 aa16.73■□□□□ 0.27
SPHK1-201ENST00000323374 RBAKDNA6NC62 111 aa16.72■□□□□ 0.27
SPHK1-201ENST00000323374 RNF182Q8N6D2 247 aa16.72■□□□□ 0.27
SPHK1-201ENST00000323374 GATD1Q8NB37 220 aa16.72■□□□□ 0.27
SPHK1-201ENST00000323374 USP24Q9UPU5 2620 aa16.72■□□□□ 0.27
SPHK1-201ENST00000323374 TMSB15BA0A087X1C1 80 aa16.71■□□□□ 0.27
SPHK1-201ENST00000323374 KIR2DL5BA0A0G2JN68 375 aa16.71■□□□□ 0.27
SPHK1-201ENST00000323374 KIR2DL5BA0A0G2JPC4 375 aa16.71■□□□□ 0.27
SPHK1-201ENST00000323374 PRAC2D3DTV9 90 aa16.71■□□□□ 0.27
SPHK1-201ENST00000323374 KIR2DL5AQ8N109 375 aa16.71■□□□□ 0.27
SPHK1-201ENST00000323374 M0R2Z0 102 aa16.7■□□□□ 0.26
SPHK1-201ENST00000323374 NDUFA4O00483 81 aa16.7■□□□□ 0.26
SPHK1-201ENST00000323374 RPS20P60866 119 aaKnown RBP16.7■□□□□ 0.26
SPHK1-201ENST00000323374 SRSF1Q07955 248 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■□□□ 12.7
SPHK1-201ENST00000323374 ERCC8Q13216 396 aa16.7■□□□□ 0.26
SPHK1-201ENST00000323374 NDUFAF3Q9BU61 184 aa16.7■□□□□ 0.26
SPHK1-201ENST00000323374 A1L4Q6 167 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 C3orf79P0CE67 100 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 ZNF80P51504 273 aaPredicted RBP16.69■□□□□ 0.26
SPHK1-201ENST00000323374 LYZL1Q6UWQ5 148 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 C8orf86Q6ZUL3 223 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 MRPL53Q96EL3 112 aaKnown RBP16.69■□□□□ 0.26
SPHK1-201ENST00000323374 URB1-AS1Q96HZ7 61 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 MYO18BQ8IUG5 2567 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 A0A096LNT2 108 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 TRAV8-2A0A0B4J237 113 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 PF4V1P10720 104 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 Q6ZS46 218 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 Q8N976 141 aa16.69■□□□□ 0.26
SPHK1-201ENST00000323374 CHCHD1Q96BP2 118 aaKnown RBP16.69■□□□□ 0.26
SPHK1-201ENST00000323374 TRBV12-3P01733 135 aa16.68■□□□□ 0.26
SPHK1-201ENST00000323374 J3QLI3 93 aa16.67■□□□□ 0.26
SPHK1-201ENST00000323374 SRSF2Q01130 221 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms