RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
TPM3-204ENST00000323144 HSPG2P98160 4391 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 C5orf51A6NDU8 294 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 TCRBP04435 133 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 TNP2Q05952 138 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 BAXQ07812 192 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 S100A7AQ86SG5 101 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 SAT2Q96F10 170 aaPredicted RBP8.62□□□□□ -1.03
TPM3-204ENST00000323144 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
TPM3-204ENST00000323144 NBDYA0A0U1RRE5 68 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 H7BYZ3 331 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 M0R3E3 92 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 HOXA5P20719 270 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 RAB32Q13637 225 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 OR10J6PQ8NGY7 276 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 ZNF586Q9NXT0 402 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 TIMM8BQ9Y5J9 83 aaPredicted RBP8.61□□□□□ -1.03
TPM3-204ENST00000323144 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
TPM3-204ENST00000323144 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 CBY3A6NI87 242 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 GAGE7O76087 117 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 CT45A10P0DMU9 189 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 PYYP10082 97 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 FGF7P21781 194 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 FAM3BP58499 235 aaPredicted RBP8.6□□□□□ -1.03
TPM3-204ENST00000323144 GCSAMLQ5JQS6 135 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 C12orf45Q8N5I9 185 aaPredicted RBP8.6□□□□□ -1.03
TPM3-204ENST00000323144 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 TMPRSS5Q9H3S3 457 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 LYRM2Q9NU23 88 aaPredicted RBP8.6□□□□□ -1.03
TPM3-204ENST00000323144 SLC39A9Q9NUM3 307 aa8.6□□□□□ -1.03
TPM3-204ENST00000323144 TRAV26-1A0A087WT03 109 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 A0A0J9YY99 117 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 SULT1A1P50225 295 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 ERCC8Q13216 396 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 BTN1A1Q13410 526 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 ZNF493Q6ZR52 646 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 SSX7Q7RTT5 188 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 C2orf50Q96LR7 162 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 C20orf144Q9BQM9 153 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 RNF24Q9Y225 148 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 MUC4Q99102 2169 aa8.59□□□□□ -1.03
TPM3-204ENST00000323144 IGKV2-40A0A087WW87 121 aaPredicted RBP8.58□□□□□ -1.04
TPM3-204ENST00000323144 NDUFB4O95168 129 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 IGKV2D-40P01614 121 aaPredicted RBP8.58□□□□□ -1.04
TPM3-204ENST00000323144 H2AFB2P0C5Z0 115 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 LEPP41159 167 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 IL15RAQ13261 267 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 PRR9Q5T870 116 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 Q6ZTI0 123 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 STX12Q86Y82 276 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 C6orf223Q8N319 242 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 TMEM252Q8N6L7 170 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 OR1L4Q8NGR5 311 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 PFDN5Q99471 154 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 GPN1Q9HCN4 374 aaPredicted RBP8.58□□□□□ -1.04
TPM3-204ENST00000323144 DNAJC4Q9NNZ3 241 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
TPM3-204ENST00000323144 TRBV19A0A075B6N1 114 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 SNURFLB1AK76 121 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 ZNF253O75346 499 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 RLN2P04090 185 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 RPL29P47914 159 aaKnown RBP8.57□□□□□ -1.04
TPM3-204ENST00000323144 CCL18P55774 89 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 OR5I1Q13606 314 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 CLINT1Q14677 625 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 GUK1Q16774 197 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 Q6ZRG5 221 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 EXOC3-AS1Q8N2X6 119 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 C11orf72Q8NBR9 251 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 THAP6Q8TBB0 222 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 GNPNAT1Q96EK6 184 aaPredicted RBP8.57□□□□□ -1.04
TPM3-204ENST00000323144 CCDC32Q9BV29 185 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 SLC25A2Q9BXI2 301 aa8.57□□□□□ -1.04
TPM3-204ENST00000323144 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
TPM3-204ENST00000323144 C7orf71A4D174 169 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 PVALBP20472 110 aaPredicted RBP8.56□□□□□ -1.04
TPM3-204ENST00000323144 M6PRP20645 277 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 CD300CQ08708 224 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 RAB31Q13636 194 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 Q6ZQT7 251 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 BLNKQ8WV28 456 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
TPM3-204ENST00000323144 NPCDR1Q9BY65 106 aa8.56□□□□□ -1.04
TPM3-204ENST00000323144 FAM240BA0A1B0GVZ2 78 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 KLLNB2CW77 178 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 SIX6O95475 246 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms