RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 SPINK8P0C7L1 97 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 FAM201AQ5SY85 155 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 GTSCR1Q86UQ5 136 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 WFDC3Q8IUB2 231 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 SYT8Q8NBV8 401 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 C17orf77Q96MU5 243 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 TMEM133Q9H2Q1 129 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
CD46-201ENST00000322875 DPM2O94777 84 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 APOMO95445 188 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 ZC2HC1BQ5TFG8 222 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 FAM169BQ8N8A8 192 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 RNF183Q96D59 192 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 ATP5LO75964 103 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 CRYGBP07316 175 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 PEAR1Q5VY43 1037 aaPredicted RBP6.12□□□□□ -1.43
CD46-201ENST00000322875 C8orf31Q8N9H6 132 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 TMEM178AQ8NBL3 297 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 CARD19Q96LW7 228 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 TMEM8BA6NDV4 472 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 CEACAM4O75871 244 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 GAS8-AS1O95177 125 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 WT1P19544 449 aaPredicted RBP6.12□□□□□ -1.43
CD46-201ENST00000322875 CKS2P33552 79 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 LEPP41159 167 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 SRSF2Q01130 221 aaKnown RBP6.12□□□□□ -1.43
CD46-201ENST00000322875 SBSPONQ8IVN8 264 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 SHANK2-AS3Q9BTD1 123 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 DEFB127Q9H1M4 99 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 NGBQ9NPG2 151 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 NAV3Q8IVL0 2385 aa6.12□□□□□ -1.43
CD46-201ENST00000322875 DNAJC13O75165 2243 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 TRGV5A0A0B4J1U4 118 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 H3BRN7 92 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 SH2D1AO60880 128 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 FCN3O75636 299 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 LINC00311Q8N616 119 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 VPS13AQ96RL7 3174 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
CD46-201ENST00000322875 MUC6Q6W4X9 2439 aa6.11□□□□□ -1.43
CD46-201ENST00000322875 IGLV3-9A0A075B6K5 115 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 RBP4P02753 201 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 TWIST1Q15672 202 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 TEX36Q5VZQ5 186 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 HCP5Q6MZN7 132 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 FAM216BQ8N7L0 139 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 TPPP3Q9BW30 176 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 MAP1LC3AQ9H492 121 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 I3L2K1 104 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
CD46-201ENST00000322875 UBE2D3P61077 147 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 UBE2D2P62837 147 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 CITED1Q99966 193 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 TRAV40A0A0B4J280 105 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 TEX22C9J3V5 150 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 IGKV1-17P01599 117 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 EGR2P11161 476 aaPredicted RBP6.1□□□□□ -1.43
CD46-201ENST00000322875 PPIFP30405 207 aaKnown RBP6.1□□□□□ -1.43
CD46-201ENST00000322875 CCL13Q99616 98 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 FOXC2Q99958 501 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 RNF7Q9UBF6 113 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 CELSR3Q9NYQ7 3312 aa6.1□□□□□ -1.43
CD46-201ENST00000322875 TNFRSF6BO95407 300 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 CD40P25942 277 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 CXCL12P48061 93 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 UBE2D1P51668 147 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 LYZP61626 148 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 ZNF672Q499Z4 452 aaPredicted RBP6.09□□□□□ -1.43
CD46-201ENST00000322875 SCNM1Q9BWG6 230 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
CD46-201ENST00000322875 SLC25A15Q9Y619 301 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 A0A087WX48 190 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 Q8N8P6 123 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 GLMPQ8WWB7 406 aa6.09□□□□□ -1.43
CD46-201ENST00000322875 PRSS1P07477 247 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 GAGE5Q13069 117 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 GAGE6Q13070 117 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 PDE6HQ13956 83 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 TMEM95Q3KNT9 176 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 VMA21Q3ZAQ7 101 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 PMS2CLQ68D20 193 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 DLX4Q92988 240 aaPredicted RBP6.08□□□□□ -1.44
CD46-201ENST00000322875 MSRB1Q9NZV6 116 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 LINC01548A6NM66 108 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 M0R3E3 92 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 IGHG3P01860 377 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 SRD5A1P18405 259 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 ZNF80P51504 273 aaPredicted RBP6.08□□□□□ -1.44
CD46-201ENST00000322875 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 VCX2Q9H322 139 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 IGHV3-21A0A0B4J1V1 117 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
CD46-201ENST00000322875 ASCL5Q7RTU5 278 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 TEN1Q86WV5 123 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 PRR25Q96S07 402 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 PIEZO1Q92508 2521 aa6.08□□□□□ -1.44
CD46-201ENST00000322875 AGRNO00468 2067 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms