RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 OR10X1Q8NGY0 326 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 OBP2BQ9NPH6 170 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 WFDC3Q8IUB2 231 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 KLF14Q8TD94 323 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM234AQ9H0X4 552 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 MALRD1Q5VYJ5 2156 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A10PA6NDY2 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A18PA6NE21 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A16PA6NEW6 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A20PA6NIJ5 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A8PA6NJQ4 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A7PA6NKC0 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A22PA8MWA6 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A12PA8MX19 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A5PA8MXJ8 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A23PA8MXZ1 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 CCDC179H3BU77 68 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A15PP0C7V4 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A13PP0C7W8 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A14PP0C7W9 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FAM90A24PP0C7X0 464 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 MBNL2Q5VZF2 373 aaKnown RBP7.49□□□□□ -1.21
CAPN3-201ENST00000318023 IL17RELQ6ZVW7 336 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 PHLDA1Q8WV24 401 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-201ENST00000318023 BPESC1Q9GZL8 116 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 PCBD1P61457 104 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 LOXL1Q08397 574 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-201ENST00000318023 FOXI1Q12951 378 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 KRTAP1-3Q8IUG1 177 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 YAE1D1Q9NRH1 226 aa7.49□□□□□ -1.21
CAPN3-201ENST00000318023 TNCP24821 2201 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 GLRXP35754 106 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 GNG5P63218 68 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 ZNF146Q15072 292 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 FAM201AQ5SY85 155 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 MOB1BQ7L9L4 216 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 MOB3BQ86TA1 216 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 FOXC2Q99958 501 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 LINC00473A8K010 186 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 IGLL5B9A064 214 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-201ENST00000318023 KLRD1Q13241 179 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 DEFB108BQ8NET1 73 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 PRO0461Q9UI25 63 aa7.48□□□□□ -1.21
CAPN3-201ENST00000318023 TRAV5A0A0B4J249 113 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 TCRBV4S1A1TA0A5B7 111 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 B9A039 149 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 E9PLD3 99 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 WNT9BO14905 357 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 PRTN3P24158 256 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 Q6AWC8 147 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 KIR2DL4Q99706 377 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 LOC389332A0A1B0GUA5 103 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 PRSS46E5RG02 174 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 NPIPB6E9PJ23 425 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 SRSF2Q01130 221 aaKnown RBP7.47□□□□□ -1.21
CAPN3-201ENST00000318023 DIAPH2-AS1Q14236 149 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 MORN5Q5VZ52 161 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 LINC00322Q6ZN03 302 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-201ENST00000318023 ATP5L2Q7Z4Y8 100 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 PTH2Q96A98 100 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 CHAC1Q9BUX1 264 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 RAB1BQ9H0U4 201 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 BEX4Q9NWD9 120 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-201ENST00000318023 AMMECR1Q9Y4X0 333 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-201ENST00000318023 CSN1S1P47710 185 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 PRSS3P2Q8NHM4 247 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 DPF1Q92782 380 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 SIGLEC8Q9NYZ4 499 aa7.47□□□□□ -1.21
CAPN3-201ENST00000318023 CUBNO60494 3623 aa7.46□□□□□ -1.21
CAPN3-201ENST00000318023 TRAV3A0A0B4J244 114 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV4-61A0A0C4DH41 118 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 LINC01548A6NM66 108 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 INAFM1C9JVW0 142 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 LY6G6DO95868 133 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 UBE2L3P68036 154 aaKnown RBP7.46□□□□□ -1.22
CAPN3-201ENST00000318023 C11orf71Q6IPW1 123 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 DTX2Q86UW9 622 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 C3orf56Q8N813 242 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV3-43A0A0B4J1X8 118 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 OVOL3O00110 214 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 IGHV3-43DP0DP04 118 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 PYYP10082 97 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 EFNA4P52798 201 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 ZFAND6Q6FIF0 208 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 DKK2Q9UBU2 259 aa7.46□□□□□ -1.22
CAPN3-201ENST00000318023 M0QXV9 152 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 RBP4P02753 201 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 GRPP07492 148 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 FAM231DQ6ZW35 169 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 TEX29Q8N6K0 151 aa7.45□□□□□ -1.22
CAPN3-201ENST00000318023 ZNF502Q8TBZ5 544 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms