RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 DNAH10Q8IVF4 4471 aa5.93□□□□□ -1.46
CNOT4-201ENST00000315544 APCSP02743 223 aa5.93□□□□□ -1.46
CNOT4-201ENST00000315544 NBEAP1P0C6P0 100 aa5.93□□□□□ -1.46
CNOT4-201ENST00000315544 HIST1H1EP10412 219 aaKnown RBP5.93□□□□□ -1.46
CNOT4-201ENST00000315544 DSCR9P59020 149 aa5.93□□□□□ -1.46
CNOT4-201ENST00000315544 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 BUB3O43684 328 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 RPLP1P05386 114 aaKnown RBP5.92□□□□□ -1.46
CNOT4-201ENST00000315544 C10orf113Q5VZT2 155 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 MORN3Q6PF18 240 aaPredicted RBP5.92□□□□□ -1.46
CNOT4-201ENST00000315544 EXOC3-AS1Q8N2X6 119 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 OR10X1Q8NGY0 326 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 SIGLEC8Q9NYZ4 499 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 USP9YO00507 2555 aaPredicted RBP5.92□□□□□ -1.46
CNOT4-201ENST00000315544 CD5LO43866 347 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 IGHV4-39P01824 125 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 GPR6P46095 362 aaPredicted RBP5.92□□□□□ -1.46
CNOT4-201ENST00000315544 TFPI2P48307 235 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 HBBP68871 147 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 HIST2H2BCQ6DN03 193 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 SLC25A24Q6NUK1 477 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 MT-CO2P00403 227 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 GNG10P50151 68 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 DLX4Q92988 240 aaPredicted RBP5.92□□□□□ -1.46
CNOT4-201ENST00000315544 POLEQ07864 2286 aa5.92□□□□□ -1.46
CNOT4-201ENST00000315544 SIVA1O15304 175 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 CCL8P80075 99 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 LGALS9BQ3B8N2 356 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 SPATA45Q537H7 98 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 LGALS9CQ6DKI2 356 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 C9orf47Q6ZRZ4 202 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 C20orf173Q96LM9 149 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 CHRDL1Q9BU40 450 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 VPS13DQ5THJ4 4388 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.91□□□□□ -1.46
CNOT4-201ENST00000315544 LINC01548A6NM66 108 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 CEBPGP53567 150 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 ODF1Q14990 250 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 FAM104BQ5XKR9 115 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 LEMD1Q68G75 181 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 MRPL53Q96EL3 112 aaKnown RBP5.91□□□□□ -1.46
CNOT4-201ENST00000315544 CLEC5AQ9NY25 188 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 FBN1P35555 2871 aaKnown RBP5.91□□□□□ -1.46
CNOT4-201ENST00000315544 MDFIC2A0A1B0GVS7 189 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 PRAC2D3DTV9 90 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 IGLV1-40P01703 118 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 OR1L4Q8NGR5 311 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 NEK7Q8TDX7 302 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 OR5B12Q96R08 314 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 PRR25Q96S07 402 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 TXN2Q99757 166 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 NGBQ9NPG2 151 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 UQCR10Q9UDW1 63 aa5.91□□□□□ -1.46
CNOT4-201ENST00000315544 RIPPLY3P57055 190 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 VSTM2AQ8TAG5 236 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 SRSF12Q8WXF0 261 aaKnown RBP5.9□□□□□ -1.46
CNOT4-201ENST00000315544 TRAV8-6A0A0B4J262 113 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 PRTN3P24158 256 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 SBSPONQ8IVN8 264 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 CNEP1R1Q8N9A8 125 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 GLMPQ8WWB7 406 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 GNG12Q9UBI6 72 aa5.9□□□□□ -1.46
CNOT4-201ENST00000315544 HUWE1Q7Z6Z7 4374 aaKnown RBP5.9□□□□□ -1.47
CNOT4-201ENST00000315544 SLC25A17O43808 307 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 RPL32P62910 135 aaKnown RBP5.9□□□□□ -1.47
CNOT4-201ENST00000315544 PMCHL1Q16048 86 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 TIGITQ495A1 244 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 CST9LP1Q5W188 147 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 PET117Q6UWS5 81 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 ZFAND2AQ8N6M9 145 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 TM2D2Q9BX73 214 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 MS4A6AQ9H2W1 248 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 HIGD1BQ9P298 99 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 ONECUT1Q9UBC0 465 aa5.9□□□□□ -1.47
CNOT4-201ENST00000315544 SETXQ7Z333 2677 aaKnown RBP5.9□□□□□ -1.47
CNOT4-201ENST00000315544 ACTL6BO94805 426 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 EVI2AP22794 236 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 STXBP6Q8NFX7 210 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 SAP30LQ9HAJ7 183 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 TRBV7-3A0A075B6L6 115 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 A0A1W2PPV4 95 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 SLC35B1P78383 322 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 MRPL51Q4U2R6 128 aaKnown RBP5.89□□□□□ -1.47
CNOT4-201ENST00000315544 MEGF9Q9H1U4 602 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 SVILO95425 2214 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 A0A1B0GW15 77 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 IGF1P05019 195 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 SLC25A5P05141 298 aaKnown RBP5.89□□□□□ -1.47
CNOT4-201ENST00000315544 TNFRSF1AP19438 455 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 RPL19P84098 196 aaKnown RBP5.89□□□□□ -1.47
CNOT4-201ENST00000315544 VGLL1Q99990 258 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 TMEM191AQ9H0A3 160 aa5.89□□□□□ -1.47
CNOT4-201ENST00000315544 SPTA1P02549 2419 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 B9A039 149 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 HNF1AP20823 631 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 UBE2G1P62253 170 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 C5orf64Q2M2E5 130 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 IL17DQ8TAD2 202 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms