RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
TUBA3E-201ENST00000312988 CCL20P78556 96 aa11.66□□□□□ -0.54
TUBA3E-201ENST00000312988 CST9LP1Q5W188 147 aa11.66□□□□□ -0.54
TUBA3E-201ENST00000312988 PCNPQ8WW12 178 aaKnown RBP11.66□□□□□ -0.54
TUBA3E-201ENST00000312988 RPH3ALQ9UNE2 315 aa11.66□□□□□ -0.54
TUBA3E-201ENST00000312988 YTHDF2Q9Y5A9 579 aaKnown RBP11.66□□□□□ -0.54
TUBA3E-201ENST00000312988 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
TUBA3E-201ENST00000312988 F6UB75 175 aa11.65□□□□□ -0.54
TUBA3E-201ENST00000312988 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
TUBA3E-201ENST00000312988 FOXI2Q6ZQN5 318 aa11.65□□□□□ -0.54
TUBA3E-201ENST00000312988 STHQ8IWL8 128 aa11.65□□□□□ -0.54
TUBA3E-201ENST00000312988 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
TUBA3E-201ENST00000312988 FAM74A7A6NL05 159 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 K7EIL1 84 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 PAGE4O60829 102 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 IFNA1P01562 189 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 SUMO1P63165 101 aaKnown RBP11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 DEFB121Q5J5C9 76 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 ZNF767PQ75MW2 155 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 CITED4Q96RK1 184 aa11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.55
TUBA3E-201ENST00000312988 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 IGKV3-20P01619 116 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 RAB14P61106 215 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 GDF5OSQ5U4N7 250 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 OR4B1Q8NGF8 309 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 MANBALQ9NQG1 85 aa11.64□□□□□ -0.55
TUBA3E-201ENST00000312988 A0A0J9YX75 114 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 PRAC2D3DTV9 90 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 RPL35AP18077 110 aaKnown RBP11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 DEFA6Q01524 100 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 IFITM2Q01629 132 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 C5orf17Q8NAS9 161 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 OR8A1Q8NGG7 326 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 NKX6-2Q9C056 277 aaPredicted RBP11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
TUBA3E-201ENST00000312988 IGKV2-40A0A087WW87 121 aaPredicted RBP11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 DUSP14O95147 198 aaKnown RBP11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 IGKV2D-40P01614 121 aaPredicted RBP11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 GNG5P63218 68 aa11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 HAGHQ16775 308 aa11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 AGRNO00468 2067 aa11.62□□□□□ -0.55
TUBA3E-201ENST00000312988 H3BMM0 161 aa11.61□□□□□ -0.55
TUBA3E-201ENST00000312988 ATP5G3P48201 142 aa11.61□□□□□ -0.55
TUBA3E-201ENST00000312988 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
TUBA3E-201ENST00000312988 PPP1R14DQ9NXH3 145 aa11.61□□□□□ -0.55
TUBA3E-201ENST00000312988 LOC102724200A0A096LPH7 203 aaPredicted RBP11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 NMBP08949 121 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 GOLT1AQ6ZVE7 132 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 LYPD6BQ8NI32 183 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 BCL2P10415 239 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 ERCC8Q13216 396 aa11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
TUBA3E-201ENST00000312988 F6UZH7 168 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 K7EQM0 130 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 TCRAP04437 139 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 ATG101Q9BSB4 218 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 DNAH3Q8TD57 4116 aa11.59□□□□□ -0.55
TUBA3E-201ENST00000312988 A8MZ25 164 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 PEX7O00628 323 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 PMS2P11Q13670 270 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 VGLL1Q99990 258 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 VAX2Q9UIW0 290 aa11.58□□□□□ -0.56
TUBA3E-201ENST00000312988 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 SERTM2A0A1B0GWG4 89 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 APOC4P55056 127 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 FXYD7P58549 80 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 NUTF2P61970 127 aaKnown RBP11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 TOR2AQ5JU69 321 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 HIST1H2BAQ96A08 127 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 TXNDC17Q9BRA2 123 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 TCEAL7Q9BRU2 100 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
TUBA3E-201ENST00000312988 AKR1C3P42330 323 aa11.56□□□□□ -0.56
TUBA3E-201ENST00000312988 CLLU1Q5K131 121 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms