RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 SIGLEC9Q9Y336 463 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 COL8A1P27658 744 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 ITLN1Q8WWA0 313 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 CARD19Q96LW7 228 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 LINC00574Q9H8X3 128 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 FAM90A26D6RGX4 464 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 PRR30Q53SZ7 412 aaPredicted RBP7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 SNRNP40Q96DI7 357 aaKnown RBP7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 RNF125Q96EQ8 232 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 GAFA1Q96PS6 74 aa7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 CNOT1A5YKK6 2376 aaKnown RBP7.6□□□□□ -1.19
RBFOX1-201ENST00000311745 LTAP01374 205 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 FXYD7P58549 80 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 CACNG7P62955 275 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 OR1L4Q8NGR5 311 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 RND1Q92730 232 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 CHAC1Q9BUX1 264 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 NPCDR1Q9BY65 106 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 A0A1W2PPI3 338 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 ZG16O60844 167 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 HERVK_113P63121 156 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 RPL39P5Q59GN2 51 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 ZC2HC1BQ5TFG8 222 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 WFDC3Q8IUB2 231 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 RASL10AQ92737 203 aa7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 FLYWCH2Q96CP2 140 aaKnown RBP7.59□□□□□ -1.19
RBFOX1-201ENST00000311745 GVINP1Q7Z2Y8 2422 aa7.59□□□□□ -1.2
RBFOX1-201ENST00000311745 TRAV3A0A0B4J244 114 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 C15orf62A8K5M9 175 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 OR2J3O76001 311 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 CD40P25942 277 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 DLX4Q92988 240 aaPredicted RBP7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 PLCE1Q9P212 2302 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 TACC2O95359 2948 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 NUP37Q8NFH4 326 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 TMEM147Q9BVK8 224 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 SVILO95425 2214 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 C16orf97H3BN30 126 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 RRHO14718 337 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 KLF5Q13887 457 aaPredicted RBP7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 LEAP2Q969E1 77 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 PLPPR2Q96GM1 343 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 LINC01587Q99440 93 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 MUC6Q6W4X9 2439 aa7.58□□□□□ -1.2
RBFOX1-201ENST00000311745 CEP250Q9BV73 2442 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 FAM236AA0A1B0GUQ0 79 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 FAM236BA0A1B0GV22 79 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 TCRBV4S1A1TA0A5B7 111 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 NPIPB6E9PJ23 425 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 SPRY3O43610 288 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 TEX36Q5VZQ5 186 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 MGST3O14880 152 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 EDDM3AQ14507 147 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 NUP35Q8NFH5 326 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 ZNRD1Q9P1U0 126 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 TIMM9Q9Y5J7 89 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 URB1O60287 2271 aaKnown RBP7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 AGRNO00468 2067 aa7.57□□□□□ -1.2
RBFOX1-201ENST00000311745 ATP5LO75964 103 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 C15orf53Q8NAA6 179 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 OR10J6PQ8NGY7 276 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 ACTL6BO94805 426 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 VKORC1L1Q8N0U8 176 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 CIARTQ8N365 385 aaPredicted RBP7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 PHLDA1Q8WV24 401 aaPredicted RBP7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 CHCHD1Q96BP2 118 aaKnown RBP7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 OSTCQ9NRP0 149 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 RAXQ9Y2V3 346 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 HIGD1CA8MV81 97 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 RRN3P1Q2M238 152 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 TEN1Q86WV5 123 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 MRAPQ8TCY5 172 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 SSMEM1Q8WWF3 244 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 RPEQ96AT9 228 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 LINC00479Q96M42 142 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 CALYQ9NYX4 217 aa7.56□□□□□ -1.2
RBFOX1-201ENST00000311745 PIEZO2Q9H5I5 2752 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 A0A1W2PRX2 142 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 ZCCHC24Q8N2G6 241 aaKnown RBP7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 FAM216BQ8N7L0 139 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 ATP6V0E2Q8NHE4 81 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 PRSS3P2Q8NHM4 247 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 HIST1H4GQ99525 98 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 ZGRF1Q86YA3 2104 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 LOC389332A0A1B0GUA5 103 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 APOHP02749 345 aaPredicted RBP7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 SAA2P0DJI9 122 aaPredicted RBP7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 ITPR1Q14643 2758 aa7.55□□□□□ -1.2
RBFOX1-201ENST00000311745 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
RBFOX1-201ENST00000311745 CEND1Q8N111 149 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms