RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 MAP1LC3CQ9BXW4 147 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 IGHV3-66A0A0C4DH42 116 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 M0R1W7 72 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 TMEM11P17152 192 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 C11orf71Q6IPW1 123 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 SMAD5-AS1Q9Y6J3 95 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 TMEM189A5PLL7 270 aa19.76■□□□□ 0.75
HOXB3-201ENST00000311626 NPIPB5A8MRT5 1133 aa19.76■□□□□ 0.75
HOXB3-201ENST00000311626 OR5AL1P0C617 328 aa19.76■□□□□ 0.75
HOXB3-201ENST00000311626 EGR2P11161 476 aaPredicted RBP19.76■□□□□ 0.75
HOXB3-201ENST00000311626 RELQ04864 619 aaPredicted RBP19.76■□□□□ 0.75
HOXB3-201ENST00000311626 D6R8Y8 96 aa19.76■□□□□ 0.75
HOXB3-201ENST00000311626 CTSGP08311 255 aa19.76■□□□□ 0.75
HOXB3-201ENST00000311626 ZNF80P51504 273 aaPredicted RBP19.76■□□□□ 0.75
HOXB3-201ENST00000311626 TCTAP57738 103 aa19.76■□□□□ 0.75
HOXB3-201ENST00000311626 IGHV3OR16-13A0A075B7E8 117 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 TRAV30A0A087WSZ9 112 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 IGHV3-74A0A0B4J1X5 117 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 SMKR1H3BMG3 65 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 CSN1S1P47710 185 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 FOXE3Q13461 319 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 TTC9CQ8N5M4 171 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 AP5S1Q9NUS5 200 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 SNAI2O43623 268 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 MPV17L2Q567V2 206 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 CELSR1Q9NYQ6 3014 aa19.75■□□□□ 0.75
HOXB3-201ENST00000311626 FA2HQ7L5A8 372 aa19.74■□□□□ 0.75
HOXB3-201ENST00000311626 IGHV7-81A0A0B4J1V7 117 aa19.74■□□□□ 0.75
HOXB3-201ENST00000311626 C20orf202A1L168 122 aa19.74■□□□□ 0.75
HOXB3-201ENST00000311626 ECSCRQ19T08 205 aa19.74■□□□□ 0.75
HOXB3-201ENST00000311626 TMEM191AQ9H0A3 160 aa19.74■□□□□ 0.75
HOXB3-201ENST00000311626 ERCC8Q13216 396 aa19.72■□□□□ 0.75
HOXB3-201ENST00000311626 SPTBN4Q9H254 2564 aa19.72■□□□□ 0.75
HOXB3-201ENST00000311626 GPR183P32249 361 aa19.72■□□□□ 0.75
HOXB3-201ENST00000311626 MSRB2Q9Y3D2 182 aa19.72■□□□□ 0.75
HOXB3-201ENST00000311626 IGHG4P01861 327 aa19.72■□□□□ 0.75
HOXB3-201ENST00000311626 Q8N6K4 173 aa19.72■□□□□ 0.75
HOXB3-201ENST00000311626 IGHV3-49A0A0A0MS15 119 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 CCL25O15444 150 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 OR8A1Q8NGG7 326 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 PRR25Q96S07 402 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 HSPB8Q9UJY1 196 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 LINC01548A6NM66 108 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 RNF182Q8N6D2 247 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 ST20Q9HBF5 79 aa19.71■□□□□ 0.75
HOXB3-201ENST00000311626 VPS13CQ709C8 3753 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 NUDT3O95989 172 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 PDE6HQ13956 83 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 SIGLEC8Q9NYZ4 499 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 RABAC1Q9UI14 185 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 HSBP1L1C9JCN9 74 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 PRAC2D3DTV9 90 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 Q8N9W7 124 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 ZNF747Q9BV97 191 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 MSRB1Q9NZV6 116 aa19.7■□□□□ 0.74
HOXB3-201ENST00000311626 NCOR2Q9Y618 2525 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 CHD8Q9HCK8 2581 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 HIVEP3Q5T1R4 2406 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 PET117Q6UWS5 81 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 RPL7P18124 248 aaKnown RBP19.69■□□□□ 0.74
HOXB3-201ENST00000311626 CCDC144NLQ6NUI1 221 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 PRELID3AQ96N28 172 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 THYN1Q9P016 225 aa19.69■□□□□ 0.74
HOXB3-201ENST00000311626 A0A096LNJ9 63 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 ZNF207O43670 478 aaKnown RBP19.68■□□□□ 0.74
HOXB3-201ENST00000311626 PPIFP30405 207 aaKnown RBP19.68■□□□□ 0.74
HOXB3-201ENST00000311626 PSG9Q00887 426 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 KLRB1Q12918 225 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 TWIST1Q15672 202 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 SLC25A34Q6PIV7 304 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 WFDC3Q8IUB2 231 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 COX11Q9Y6N1 276 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 PTTG1IPP53801 180 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 C15orf32Q32M92 178 aa19.68■□□□□ 0.74
HOXB3-201ENST00000311626 MRPL51Q4U2R6 128 aaKnown RBP19.68■□□□□ 0.74
HOXB3-201ENST00000311626 A0A087X0K7 114 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 G3V318 75 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 FAM104BQ5XKR9 115 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 SCRT2Q9NQ03 307 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 COL12A1Q99715 3063 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 SPTAN1Q13813 2472 aaKnown RBP19.67■□□□□ 0.74
HOXB3-201ENST00000311626 CLEC3BP05452 202 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 UBTD1Q9HAC8 227 aa19.67■□□□□ 0.74
HOXB3-201ENST00000311626 GAS8-AS1O95177 125 aa19.66■□□□□ 0.74
HOXB3-201ENST00000311626 ORM1P02763 201 aa19.66■□□□□ 0.74
HOXB3-201ENST00000311626 ZNF575Q86XF7 245 aa19.66■□□□□ 0.74
HOXB3-201ENST00000311626 GATD1Q8NB37 220 aa19.66■□□□□ 0.74
HOXB3-201ENST00000311626 OR10AG1Q8NH19 301 aa19.66■□□□□ 0.74
HOXB3-201ENST00000311626 LINC01545Q5VT33 79 aa19.65■□□□□ 0.74
HOXB3-201ENST00000311626 ZNF48Q96MX3 618 aaPredicted RBP19.65■□□□□ 0.74
HOXB3-201ENST00000311626 ATP6V0E1O15342 81 aa19.65■□□□□ 0.74
HOXB3-201ENST00000311626 ZNF493Q6ZR52 646 aa19.65■□□□□ 0.74
HOXB3-201ENST00000311626 ORAOV1Q8WV07 137 aa19.65■□□□□ 0.74
HOXB3-201ENST00000311626 SIRPDQ9H106 197 aa19.65■□□□□ 0.74
HOXB3-201ENST00000311626 Q6AWC8 147 aa19.64■□□□□ 0.73
HOXB3-201ENST00000311626 S100A7AQ86SG5 101 aa19.64■□□□□ 0.73
HOXB3-201ENST00000311626 RHOGP84095 191 aa19.64■□□□□ 0.73
HOXB3-201ENST00000311626 ZNF738Q8NE65 137 aa19.64■□□□□ 0.73
HOXB3-201ENST00000311626 IGHV3OR16-10A0A075B7F0 116 aa19.63■□□□□ 0.73
HOXB3-201ENST00000311626 NPYP01303 97 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms