RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 GAGE4Q13068 117 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 CR1LQ2VPA4 569 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 ARTNQ5T4W7 220 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 LINC00479Q96M42 142 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 GFRA4Q9GZZ7 299 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 PEMTQ9UBM1 199 aa6.64□□□□□ -1.35
VPS41-202ENST00000310301 NOTCH2Q04721 2471 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 IGKV1-27A0A075B6S5 117 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 MYOD1P15172 320 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 TMEM190Q8WZ59 177 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 INS-IGF2F8WCM5 200 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 H3BMG7 143 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 TIMM23O14925 209 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 INSP01308 110 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 IGHV1-46P01743 117 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 LRRC75A-AS1Q8N1F1 130 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 TRGV9Q99603 122 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 ARMS2P0C7Q2 107 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 PAX8Q06710 450 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 MORN5Q5VZ52 161 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 BPESC1Q9GZL8 116 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 SPTBN1Q01082 2364 aaKnown RBP6.63□□□□□ -1.35
VPS41-202ENST00000310301 CLPSP04118 112 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 CT83Q5H943 113 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 COLCA1Q6ZS62 124 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 BOD1L2Q8IYS8 172 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 PRADC1Q9BSG0 188 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 ICE1Q9Y2F5 2266 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 E7EQL1 145 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 K7ERJ3 54 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 FCN3O75636 299 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 GAGE5Q13069 117 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 GAGE6Q13070 117 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 C10orf91Q5T1B1 145 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 CEND1Q8N111 149 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 FGFBP3Q8TAT2 258 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 RCHY1Q96PM5 261 aa6.63□□□□□ -1.35
VPS41-202ENST00000310301 A0A1W2PRX2 142 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 PRIMA1Q86XR5 153 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 TRAV13-1A0A0B4J241 112 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 IGHV1-24A0A0C4DH33 117 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 C15orf62A8K5M9 175 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 CFHR2P36980 270 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 IGFL4Q6B9Z1 124 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 Q86TA4 180 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 KLHDC3Q9BQ90 382 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 A0A0G2JRQ6 117 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 OOSP1A8MZH6 123 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 FGF6P10767 208 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 ADORA2A-AS1P86434 159 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 FBXL19-AS1Q494R0 122 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 UTF1Q5T230 341 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 LIME1Q9H400 295 aa6.62□□□□□ -1.35
VPS41-202ENST00000310301 TMEM213A2RRL7 107 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 RNF144BQ7Z419 303 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 ERCC8Q13216 396 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 C6orf226Q5I0X4 101 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 CDPF1Q6NVV7 123 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 HAPLN4Q86UW8 402 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 ZNF415Q09FC8 603 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 Q6ZVH6 145 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 LY6G5BQ8NDX9 201 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 SRRM4A7MD48 611 aaKnown RBP6.61□□□□□ -1.35
VPS41-202ENST00000310301 C1orf159Q96HA4 380 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 A0A087WWL8 130 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 M0R1W7 72 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 QRFPP83859 136 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 CYYR1Q96J86 154 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 C1orf43Q9BWL3 253 aa6.61□□□□□ -1.35
VPS41-202ENST00000310301 RBMY1FQ15415 496 aaKnown RBP6.6□□□□□ -1.35
VPS41-202ENST00000310301 ANAPC10Q9UM13 185 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 LINC00473A8K010 186 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 LYNX1G3V0Z9 82 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 CCL25O15444 150 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 MMP23AO75900 390 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 LYNX1P0DP58 116 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 MINOS1Q5TGZ0 78 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 C15orf53Q8NAA6 179 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 ZNF114Q8NC26 417 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 MINOS1-NBL1R4GNA1 71 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 AMTNQ6UX39 209 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 Q8NA96 180 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 OR11H6Q8NGC7 330 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 F8WEM9 126 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 WNT2P09544 360 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 ANKRD29Q8N6D5 301 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 ZNF581Q9P0T4 197 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 TMEM178BH3BS89 294 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
VPS41-202ENST00000310301 HAMPP81172 84 aa6.6□□□□□ -1.35
VPS41-202ENST00000310301 RPL36AP83881 106 aaKnown RBP6.6□□□□□ -1.35
VPS41-202ENST00000310301 SUMO4Q6EEV6 95 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms