RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 C1orf194Q5T5A4 169 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 LINC01006Q8NI28 216 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 Q8TAT8 98 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 SLC50A1Q9BRV3 221 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 C9JCJ5 164 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 CHEK1O14757 476 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 CD28P10747 220 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 EDN2P20800 178 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 RAB4BP61018 213 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 LYPD1Q8N2G4 141 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 PPP1R14DQ9NXH3 145 aa8.52□□□□□ -1.05
TRIM59-201ENST00000309784 LCN12Q6JVE5 192 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 PSG8Q9UQ74 426 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 SETXQ7Z333 2677 aaKnown RBP8.51□□□□□ -1.05
TRIM59-201ENST00000309784 FRZBQ92765 325 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 CITED2Q99967 270 aaPredicted RBP8.51□□□□□ -1.05
TRIM59-201ENST00000309784 TCEAL7Q9BRU2 100 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 SMAD5-AS1Q9Y6J3 95 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 A0A087WWC5 75 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 TMEM183BQ1AE95 376 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 RBPMS2Q6ZRY4 209 aaKnown RBP8.51□□□□□ -1.05
TRIM59-201ENST00000309784 ZNF331Q9NQX6 463 aaPredicted RBP8.51□□□□□ -1.05
TRIM59-201ENST00000309784 SMPXQ9UHP9 88 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 ZNF580Q9UK33 172 aa8.51□□□□□ -1.05
TRIM59-201ENST00000309784 DIRC3C9JPN6 131 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 K7EN84 100 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 CA1P00915 261 aaPredicted RBP8.5□□□□□ -1.05
TRIM59-201ENST00000309784 ZNF705DP0CH99 300 aaPredicted RBP8.5□□□□□ -1.05
TRIM59-201ENST00000309784 ZNF705BP0CI00 300 aaPredicted RBP8.5□□□□□ -1.05
TRIM59-201ENST00000309784 TMEM78Q5T7P6 136 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 FAM210BQ96KR6 192 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 NRN1Q9NPD7 142 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 C1orf196B1AJZ1 125 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 BRI3O95415 125 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 P01737 135 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 C16orf54Q6UWD8 224 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 GPHB5Q86YW7 130 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 S100A9P06702 114 aaKnown RBP8.5□□□□□ -1.05
TRIM59-201ENST00000309784 S100A6P06703 90 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 CDX1P47902 265 aaPredicted RBP8.5□□□□□ -1.05
TRIM59-201ENST00000309784 ERCC8Q13216 396 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 KLK9Q2XQG4 91 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 GLMPQ8WWB7 406 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 PEMTQ9UBM1 199 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 KLK9Q9UKQ9 250 aa8.5□□□□□ -1.05
TRIM59-201ENST00000309784 PAFAH1B2P68402 229 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 HIST1H1AQ02539 215 aaPredicted RBP8.49□□□□□ -1.05
TRIM59-201ENST00000309784 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 MRPS12O15235 138 aaKnown RBP8.49□□□□□ -1.05
TRIM59-201ENST00000309784 ZNF688P0C7X2 276 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 RAB5AP20339 215 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 ID1P41134 155 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 RPL19P84098 196 aaKnown RBP8.49□□□□□ -1.05
TRIM59-201ENST00000309784 PSG3Q16557 428 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 TCTEX1D4Q5JR98 221 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 Q86TA4 180 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 Q8N2B8 174 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
TRIM59-201ENST00000309784 FOLR2P14207 255 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 FOSL1P15407 271 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 CD33P20138 364 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 MYCNOSP40205 109 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 MEOX2P50222 304 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 RAB5BP61020 215 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 OR2D3Q8NGH3 330 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 OR10J6PQ8NGY7 276 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 DEFB1P60022 68 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 ELOBQ15370 118 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 VGLL1Q99990 258 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 OTOGQ6ZRI0 2925 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 CXorf65A6NEN9 183 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 CBLN1P23435 193 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
TRIM59-201ENST00000309784 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
TRIM59-201ENST00000309784 NSD1Q96L73 2696 aaPredicted RBP8.47□□□□□ -1.05
TRIM59-201ENST00000309784 COLCA2A8K830 154 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 PRAC2D3DTV9 90 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 PF4P02776 101 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 CXCL1P09341 107 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 MRPL54Q6P161 138 aaKnown RBP8.47□□□□□ -1.05
TRIM59-201ENST00000309784 TMEM213A2RRL7 107 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 CCL24O00175 119 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 NDUFS6O75380 124 aaKnown RBP8.47□□□□□ -1.05
TRIM59-201ENST00000309784 PSMG4Q5JS54 123 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 OR4B1Q8NGF8 309 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 DLX4Q92988 240 aaPredicted RBP8.47□□□□□ -1.05
TRIM59-201ENST00000309784 IGF2BP2-AS1Q96M15 143 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 GCGP01275 180 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 SNRPD3P62318 126 aaKnown RBP8.47□□□□□ -1.05
TRIM59-201ENST00000309784 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 NUDT11Q96G61 164 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
TRIM59-201ENST00000309784 NAGKQ9UJ70 344 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms