RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 C10orf99Q6UWK7 81 aa17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 SMAD5-AS1Q9Y6J3 95 aa17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 C19orf71A6NCJ1 209 aa17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 HIGD1CA8MV81 97 aa17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 ARL3P36405 182 aa17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 TMEM18Q96B42 140 aa17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 RPP21Q9H633 154 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-202ENST00000308354 IGLV1-40P01703 118 aa17.3■□□□□ 0.36
PDLIM2-202ENST00000308354 RPL7P18124 248 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-202ENST00000308354 KIAA1644Q3SXP7 199 aa17.3■□□□□ 0.36
PDLIM2-202ENST00000308354 ASCL2Q99929 193 aa17.3■□□□□ 0.36
PDLIM2-202ENST00000308354 PRSS22Q9GZN4 317 aa17.3■□□□□ 0.36
PDLIM2-202ENST00000308354 ZNF492Q9P255 531 aa17.3■□□□□ 0.36
PDLIM2-202ENST00000308354 P01737 135 aa17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 CFHR3Q02985 330 aa17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 COX19Q49B96 90 aa17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 IGFL4Q6B9Z1 124 aa17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 RAB9AP51151 201 aa17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 RELQ04864 619 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 PDE6HQ13956 83 aa17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 ZNF331Q9NQX6 463 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-202ENST00000308354 F2Z2F3 143 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 H3BUA1 57 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 BUB3O43684 328 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 LINC00310P59036 64 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 TMEM75Q8N9X5 138 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 ACANP16112 2415 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 DIRC3C9JPN6 131 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 HLA-DQA1P01909 254 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 TCF24Q7RTU0 167 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
PDLIM2-202ENST00000308354 OR4X2Q8NGF9 303 aa17.27■□□□□ 0.36
PDLIM2-202ENST00000308354 DAZAP1Q96EP5 407 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-202ENST00000308354 AAMDCQ9H7C9 122 aa17.27■□□□□ 0.36
PDLIM2-202ENST00000308354 FASNP49327 2511 aaKnown RBP17.27■□□□□ 0.35
PDLIM2-202ENST00000308354 LINC00587B1AMM8 73 aa17.27■□□□□ 0.35
PDLIM2-202ENST00000308354 JOSD1Q15040 202 aaPredicted RBP17.27■□□□□ 0.35
PDLIM2-202ENST00000308354 UNQ9165/PRO28630Q6UXU0 137 aa17.27■□□□□ 0.35
PDLIM2-202ENST00000308354 TMEM190Q8WZ59 177 aa17.27■□□□□ 0.35
PDLIM2-202ENST00000308354 TRBV6-1A0A0K0K1D8 114 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 K7EQM0 130 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 SERF1AO75920 110 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 GZMBP10144 247 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 PSG3Q16557 428 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 GDF5OSQ5U4N7 250 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 WIPF2Q8TF74 440 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 PSG8Q9UQ74 426 aa17.26■□□□□ 0.35
PDLIM2-202ENST00000308354 BRI3O95415 125 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 SLAQ13239 276 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 SIGLECL1Q8N7X8 197 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 GTSF1Q8WW33 167 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 ZC2HC1AQ96GY0 325 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 METTL26Q96S19 204 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 PRDM13Q9H4Q3 707 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 ZNF785A8K8V0 405 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 HLA-DMBP28068 263 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 CT83Q5H943 113 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 BAGE3Q86Y29 109 aa17.25■□□□□ 0.35
PDLIM2-202ENST00000308354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 A8MWL6 223 aa17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 APCSP02743 223 aa17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 Q0VG73 95 aa17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 RASL11AQ6T310 242 aa17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 SRIP30626 198 aa17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 ATP6V0BQ99437 205 aa17.24■□□□□ 0.35
PDLIM2-202ENST00000308354 NPIPB6E9PJ23 425 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 CAMPP49913 170 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 PSG9Q00887 426 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 DNLZQ5SXM8 178 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 ZFP30Q9Y2G7 519 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 PSMB8P28062 276 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 ZNF702PQ9H963 129 aa17.23■□□□□ 0.35
PDLIM2-202ENST00000308354 A0A0G2JLM5 398 aa17.22■□□□□ 0.35
PDLIM2-202ENST00000308354 IGHG4P01861 327 aa17.22■□□□□ 0.35
PDLIM2-202ENST00000308354 S100A7P31151 101 aa17.22■□□□□ 0.35
PDLIM2-202ENST00000308354 SSBP4Q9BWG4 385 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-202ENST00000308354 AKAP9Q99996 3911 aa17.22■□□□□ 0.35
PDLIM2-202ENST00000308354 A0A1B0GXF2 115 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 CSN1S1P47710 185 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 PRR31Q5SQ13 230 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 PGLYRP4Q96LB8 373 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 ZNF705FA8MVS1 300 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 ATP5L2Q7Z4Y8 100 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 OR2D3Q8NGH3 330 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 NPFFR1Q9GZQ6 430 aa17.21■□□□□ 0.35
PDLIM2-202ENST00000308354 IGKV2-40A0A087WW87 121 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 IGKV2D-40P01614 121 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 ESDP10768 282 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 LURAP1LQ8IV03 231 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 FOXC2Q99958 501 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 C8orf49Q96NF6 230 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 GFRA4Q9GZZ7 299 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 ZNF580Q9UK33 172 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 U3KQE9 123 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 MYO9AB2RTY4 2548 aa17.2■□□□□ 0.34
PDLIM2-202ENST00000308354 NDUFA4O00483 81 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 RPLP1P05386 114 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 KRTAP1-1Q07627 177 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.19■□□□□ 0.34
PDLIM2-202ENST00000308354 RNF182Q8N6D2 247 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms