RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KIAA1549Q9HCM3 1950 aa7.27□□□□□ -1.25
PTPRE-202ENST00000306042 A0A1B0GW15 77 aa7.27□□□□□ -1.25
PTPRE-202ENST00000306042 NDUFA3O95167 84 aa7.27□□□□□ -1.25
PTPRE-202ENST00000306042 SRP19P09132 144 aaKnown RBP7.27□□□□□ -1.25
PTPRE-202ENST00000306042 PMS2P11Q13670 270 aa7.27□□□□□ -1.25
PTPRE-202ENST00000306042 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
PTPRE-202ENST00000306042 C4orf3Q8WVX3 66 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 A0A087WX48 190 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 PSMG3-AS1Q96PY0 264 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 TMEM160Q9NX00 188 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 KMT2EQ8IZD2 1858 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 TRAV8-6A0A0B4J262 113 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 F2Z2F3 143 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 ZNF502Q8TBZ5 544 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 CHCHD5Q9BSY4 110 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 RNASE7Q9H1E1 156 aaKnown RBP7.26□□□□□ -1.25
PTPRE-202ENST00000306042 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
PTPRE-202ENST00000306042 A0A1W2PPR1 153 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 F5H768 121 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 CRLF1O75462 422 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 CD28P10747 220 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 CBLN1P23435 193 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 TMEM136Q6ZRR5 245 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 MIEN1Q9BRT3 115 aa7.26□□□□□ -1.25
PTPRE-202ENST00000306042 PARD6GQ9BYG4 376 aaPredicted RBP7.26□□□□□ -1.25
PTPRE-202ENST00000306042 CHD7Q9P2D1 2997 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 IGLV11-55A0A075B6I3 123 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 PTTG1IPP53801 180 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 ERCC8Q13216 396 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 Q1RN00 199 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 OR10J3Q5JRS4 329 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 SCGB1D4Q6XE38 83 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
PTPRE-202ENST00000306042 TMEM97Q5BJF2 176 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 ODF3L1Q8IXM7 274 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 TRAV8-1A0A0A6YYK1 113 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 ZNF324O75467 553 aaPredicted RBP7.25□□□□□ -1.25
PTPRE-202ENST00000306042 HILS1P60008 231 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
PTPRE-202ENST00000306042 OR2K2Q8NGT1 345 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
PTPRE-202ENST00000306042 FNDC4Q9H6D8 234 aaPredicted RBP7.25□□□□□ -1.25
PTPRE-202ENST00000306042 IL36BQ9NZH7 164 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 DOPEY1Q5JWR5 2465 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 H3BRN7 92 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 SUMO2P61956 95 aaKnown RBP7.25□□□□□ -1.25
PTPRE-202ENST00000306042 KIAA1644Q3SXP7 199 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 TCF23Q7RTU1 214 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 ZNF491Q8N8L2 437 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 ATP6V0BQ99437 205 aa7.25□□□□□ -1.25
PTPRE-202ENST00000306042 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 CDKN1BP46527 198 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
PTPRE-202ENST00000306042 LINC00574Q9H8X3 128 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 POLQO75417 2590 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 PTPRBP23467 1997 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 CGB3P0DN86 165 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 CGB7P0DN87 165 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 CDX1P47902 265 aaPredicted RBP7.24□□□□□ -1.25
PTPRE-202ENST00000306042 PAX9P55771 341 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 Q6ZSV7 163 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 DYNAPQ8N1N2 210 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 THAP8Q8NA92 274 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 ST20Q9HBF5 79 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 RNASE1P07998 156 aaKnown RBP7.24□□□□□ -1.25
PTPRE-202ENST00000306042 SRIP30626 198 aa7.24□□□□□ -1.25
PTPRE-202ENST00000306042 FOXA3P55318 350 aaPredicted RBP7.24□□□□□ -1.25
PTPRE-202ENST00000306042 MORN3Q6PF18 240 aaPredicted RBP7.24□□□□□ -1.25
PTPRE-202ENST00000306042 TRBV9A0A0B4J1U6 114 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 COTL1Q14019 142 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 IGLV2-23P01705 113 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 K7EIM0 57 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 ZNF114Q8NC26 417 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 OCC1Q8TAD7 63 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 MS4A6AQ9H2W1 248 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 OSTCQ9NRP0 149 aa7.23□□□□□ -1.25
PTPRE-202ENST00000306042 LOC102724200A0A096LPH7 203 aaPredicted RBP7.22□□□□□ -1.25
PTPRE-202ENST00000306042 TRAV1-1A0A0B4J248 108 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 PGPEP1LA6NFU8 196 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 PRSS2P07478 247 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 FOXI2Q6ZQN5 318 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 ORMDL3Q8N138 153 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 VAMP8Q9BV40 100 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 CYTL1Q9NRR1 136 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 C7orf71A4D174 169 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 LYL1P12980 280 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 COPS9Q8WXC6 57 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 CFHR4Q92496 578 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 C2orf88Q9BSF0 95 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 TRAV12-2A0A075B6T6 113 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 C2orf70A6NJV1 201 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 I3L2K1 104 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 SH2D1AO60880 128 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 IGHG4P01861 327 aa7.22□□□□□ -1.25
PTPRE-202ENST00000306042 RPL23P62829 140 aaKnown RBP7.22□□□□□ -1.25
PTPRE-202ENST00000306042 PIFOQ8TCI5 191 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms