RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ARL6IP6Q8N6S5 226 aa11.13□□□□□ -0.63
RAB40A-201ENST00000304236 C21orf62Q9NYP8 219 aa11.13□□□□□ -0.63
RAB40A-201ENST00000304236 PSG8Q9UQ74 426 aa11.13□□□□□ -0.63
RAB40A-201ENST00000304236 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
RAB40A-201ENST00000304236 CHEK1O14757 476 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 CD24P25063 80 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 Q56UQ5 140 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
RAB40A-201ENST00000304236 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 AAMDCQ9H7C9 122 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 C1RLQ9NZP8 487 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 A0A1B0GW15 77 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 A0A1W2PRD5 423 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 A0A1W2PRF3 423 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 A0A1W2PRM7 423 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 CTRLP40313 264 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 PSG9Q00887 426 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
RAB40A-201ENST00000304236 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
RAB40A-201ENST00000304236 KLHDC1Q8N7A1 406 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 TXN2Q99757 166 aa11.12□□□□□ -0.63
RAB40A-201ENST00000304236 ARHGAP32A7KAX9 2087 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 ZNF469Q96JG9 3925 aaPredicted RBP11.11□□□□□ -0.63
RAB40A-201ENST00000304236 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 FBLL1A6NHQ2 334 aaKnown RBP11.11□□□□□ -0.63
RAB40A-201ENST00000304236 TMEM11P17152 192 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 CSN1S1P47710 185 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 RIGQ13278 110 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 SPATA45Q537H7 98 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 Q6AWC8 147 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
RAB40A-201ENST00000304236 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
RAB40A-201ENST00000304236 BTF3P20290 206 aaKnown RBP11.1□□□□□ -0.63
RAB40A-201ENST00000304236 ATP5J2P56134 94 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 SIRPDQ9H106 197 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
RAB40A-201ENST00000304236 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.1□□□□□ -0.63
RAB40A-201ENST00000304236 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 C20orf202A1L168 122 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 TOX4O94842 621 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
RAB40A-201ENST00000304236 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 RPL7P18124 248 aaKnown RBP11.1□□□□□ -0.63
RAB40A-201ENST00000304236 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 GATD1Q8NB37 220 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 UQCR10Q9UDW1 63 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 ABCA2Q9BZC7 2435 aa11.1□□□□□ -0.63
RAB40A-201ENST00000304236 F8W735 103 aaPredicted RBP11.09□□□□□ -0.63
RAB40A-201ENST00000304236 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
RAB40A-201ENST00000304236 ZFP36P26651 326 aaKnown RBP11.09□□□□□ -0.63
RAB40A-201ENST00000304236 NDPQ00604 133 aa11.09□□□□□ -0.63
RAB40A-201ENST00000304236 SH2D7A6NKC9 451 aaPredicted RBP11.08□□□□□ -0.64
RAB40A-201ENST00000304236 TCAPO15273 167 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 NDUFB8O95169 186 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 FBLN7Q53RD9 439 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 IGHV2-70DA0A0C4DH43 119 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 ZNF785A8K8V0 405 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 UBE2E1P51965 193 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 EFNA4P52798 201 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 URB1-AS1Q96HZ7 61 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 S4R3C0 116 aa11.08□□□□□ -0.64
RAB40A-201ENST00000304236 IGHV7-81A0A0B4J1V7 117 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 OR5AL1P0C617 328 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 KLK9Q2XQG4 91 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 EBLN2Q6P2I7 272 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 RABAC1Q9UI14 185 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 OVOL3O00110 214 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 RPLP1P05386 114 aaKnown RBP11.07□□□□□ -0.64
RAB40A-201ENST00000304236 LINC00614P0C842 121 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
RAB40A-201ENST00000304236 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 COX8CQ7Z4L0 72 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 Q8N9W7 124 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 FAM110DQ8TAY7 271 aaPredicted RBP11.07□□□□□ -0.64
RAB40A-201ENST00000304236 TMEM70Q9BUB7 260 aa11.07□□□□□ -0.64
RAB40A-201ENST00000304236 TRAV9-2A0A087WT02 112 aa11.06□□□□□ -0.64
RAB40A-201ENST00000304236 CTSGP08311 255 aa11.06□□□□□ -0.64
RAB40A-201ENST00000304236 LPAR2Q9HBW0 351 aa11.06□□□□□ -0.64
RAB40A-201ENST00000304236 M0R3E3 92 aa11.05□□□□□ -0.64
RAB40A-201ENST00000304236 CRIP1P50238 77 aa11.05□□□□□ -0.64
RAB40A-201ENST00000304236 RAB9AP51151 201 aa11.05□□□□□ -0.64
RAB40A-201ENST00000304236 FN1P02751 2386 aaKnown RBP11.05□□□□□ -0.64
RAB40A-201ENST00000304236 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
RAB40A-201ENST00000304236 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
RAB40A-201ENST00000304236 CRXO43186 299 aaPredicted RBP11.05□□□□□ -0.64
RAB40A-201ENST00000304236 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
RAB40A-201ENST00000304236 ARMS2P0C7Q2 107 aa11.04□□□□□ -0.64
RAB40A-201ENST00000304236 BCL6BQ8N143 479 aaPredicted RBP11.04□□□□□ -0.64
RAB40A-201ENST00000304236 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
RAB40A-201ENST00000304236 IGHV1-24A0A0C4DH33 117 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
RAB40A-201ENST00000304236 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
RAB40A-201ENST00000304236 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 LCN12Q6JVE5 192 aa11.03□□□□□ -0.64
RAB40A-201ENST00000304236 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms