RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 IGKV2D-40P01614 121 aaPredicted RBP10.26□□□□□ -0.77
TVP23A-201ENST00000299866 IGKCP01834 107 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 LYPD2Q6UXB3 125 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
TVP23A-201ENST00000299866 CEP250Q9BV73 2442 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 TRBV6-1A0A0K0K1D8 114 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 F8W1H4 67 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 NDUFS8O00217 210 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 LCNL1Q6ZST4 164 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 MAP1LC3AQ9H492 121 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 SMG1Q96Q15 3661 aaKnown RBP10.25□□□□□ -0.77
TVP23A-201ENST00000299866 E9PLD3 99 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 IL4P05112 153 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 MC5RP33032 325 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 SHANK2-AS3Q9BTD1 123 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 FBXL15Q9H469 300 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 HIGD1BQ9P298 99 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 GATA1P15976 413 aaPredicted RBP10.25□□□□□ -0.77
TVP23A-201ENST00000299866 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
TVP23A-201ENST00000299866 ZNF474Q6S9Z5 364 aaPredicted RBP10.25□□□□□ -0.77
TVP23A-201ENST00000299866 Q8TAT8 98 aa10.25□□□□□ -0.77
TVP23A-201ENST00000299866 EGR2P11161 476 aaPredicted RBP10.24□□□□□ -0.77
TVP23A-201ENST00000299866 FDCSPQ8NFU4 85 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 CCL17Q92583 94 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 TEX36Q5VZQ5 186 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 C22orf34Q6ZV56 151 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 SIGLEC9Q9Y336 463 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 AGRNO00468 2067 aa10.24□□□□□ -0.77
TVP23A-201ENST00000299866 TRAV26-1A0A087WT03 109 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 TRAV40A0A0B4J280 105 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 SRSF6Q13247 344 aaKnown RBP10.23□□□□□ -0.77
TVP23A-201ENST00000299866 PLGLAQ15195 96 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 GAGE13Q4V321 117 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 SVIPQ8NHG7 77 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 IGFL4Q6B9Z1 124 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 TMEM158Q8WZ71 300 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 A0A1B0GWB2 263 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 NDUFB3O43676 98 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 SEM1Q6ZVN7 128 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 HIST1H4GQ99525 98 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 SPATA25Q9BR10 227 aa10.23□□□□□ -0.77
TVP23A-201ENST00000299866 TEX22C9J3V5 150 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 H3BRN7 92 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 DPM2O94777 84 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 ORM1P02763 201 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 FAM169BQ8N8A8 192 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 TM2D2Q9BX73 214 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 I3L2K1 104 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 PRRG2O14669 202 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 RNF125Q96EQ8 232 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 ARRDC1-AS1Q9H2J1 176 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 CNIH1O95406 144 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 ZNF80P51504 273 aaPredicted RBP10.22□□□□□ -0.77
TVP23A-201ENST00000299866 KLF17Q5JT82 389 aaPredicted RBP10.22□□□□□ -0.77
TVP23A-201ENST00000299866 PVRIGQ6DKI7 326 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
TVP23A-201ENST00000299866 TNFRSF6BO95407 300 aa10.21□□□□□ -0.77
TVP23A-201ENST00000299866 MUC3AQ02505 3323 aa10.21□□□□□ -0.77
TVP23A-201ENST00000299866 MALRD1Q5VYJ5 2156 aa10.21□□□□□ -0.77
TVP23A-201ENST00000299866 ZNF491Q8N8L2 437 aa10.21□□□□□ -0.77
TVP23A-201ENST00000299866 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
TVP23A-201ENST00000299866 K7EM74 188 aa10.21□□□□□ -0.78
TVP23A-201ENST00000299866 FAM27E3Q08E93 113 aa10.21□□□□□ -0.78
TVP23A-201ENST00000299866 ZMAT4Q9H898 229 aa10.21□□□□□ -0.78
TVP23A-201ENST00000299866 RNF185Q96GF1 192 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 BOD1L1Q8NFC6 3051 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 NDUFA3O95167 84 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 CRYBA4P53673 196 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 SFTA2Q6UW10 78 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 LYPD1Q8N2G4 141 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 TTC9CQ8N5M4 171 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 LINC00311Q8N616 119 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 PRSS33Q8NF86 280 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 KALRNO60229 2985 aa10.2□□□□□ -0.78
TVP23A-201ENST00000299866 COL27A1Q8IZC6 1860 aaPredicted RBP10.19□□□□□ -0.78
TVP23A-201ENST00000299866 PRR25Q96S07 402 aa10.19□□□□□ -0.78
TVP23A-201ENST00000299866 GEMIN7Q9H840 131 aaKnown RBP10.19□□□□□ -0.78
TVP23A-201ENST00000299866 CTSZQ9UBR2 303 aa10.19□□□□□ -0.78
TVP23A-201ENST00000299866 SPENQ96T58 3664 aaKnown RBP10.19□□□□□ -0.78
TVP23A-201ENST00000299866 IGHV1-8P0DP01 117 aa10.19□□□□□ -0.78
TVP23A-201ENST00000299866 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
TVP23A-201ENST00000299866 K7EIM0 57 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 APOMO95445 188 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 CD40P25942 277 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
TVP23A-201ENST00000299866 CRYGBP07316 175 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 COX7A1P24310 79 aa10.18□□□□□ -0.78
TVP23A-201ENST00000299866 LOXP28300 417 aaPredicted RBP10.18□□□□□ -0.78
TVP23A-201ENST00000299866 NXT2Q9NPJ8 142 aaKnown RBP10.18□□□□□ -0.78
TVP23A-201ENST00000299866 POLEQ07864 2286 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms