RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 TFF2Q03403 129 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 CPAMD8Q8IZJ3 1885 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 SLC25A16P16260 332 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 ATP5G1P05496 136 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 CD55P08174 381 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 BAALC-AS2P0C853 105 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 MPZP25189 248 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 LINC01545Q5VT33 79 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 C1orf210Q8IVY1 113 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 SLC22A18ASQ8N1D0 253 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 DEFB124Q8NES8 71 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 PILRAQ9UKJ1 303 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 SPTBN4Q9H254 2564 aa9.23□□□□□ -0.93
HDGFL3-201ENST00000299633 CCL4P13236 92 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 C14orf178Q8N769 122 aaPredicted RBP9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 C22orf46C9J442 243 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 C4orf51C9J302 202 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 ZIC4Q8N9L1 334 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 FOXS1O43638 330 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 CTSBP07858 339 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 LYL1P12980 280 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 ADCYAP1P18509 176 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 DEFB104AQ8WTQ1 72 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 ACP7Q6ZNF0 438 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 LHFPL6Q9Y693 200 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 FOXH1O75593 365 aa9.22□□□□□ -0.93
HDGFL3-201ENST00000299633 A0A1B0GTI1 187 aa9.21□□□□□ -0.93
HDGFL3-201ENST00000299633 PFN2P35080 140 aa9.21□□□□□ -0.93
HDGFL3-201ENST00000299633 MCRIP2Q9BUT9 160 aaKnown RBP9.21□□□□□ -0.93
HDGFL3-201ENST00000299633 TRIP6Q15654 476 aaKnown RBP9.21□□□□□ -0.93
HDGFL3-201ENST00000299633 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 UBE2BP63146 152 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 ANXA2RQ3ZCQ2 193 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 TRGV1A0A0A0MS02 117 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 ATP5J2P56134 94 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 SMIM2Q9BVW6 85 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 H0YIZ8 118 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 RNF115Q9Y4L5 304 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 ZNF138P52744 262 aa9.21□□□□□ -0.94
HDGFL3-201ENST00000299633 RSPO4Q2I0M5 234 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 CR1P17927 2039 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 IGKV2-40A0A087WW87 121 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 IGKV2D-40P01614 121 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 HLA-DRB4P13762 266 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 RFNGQ9Y644 331 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 HLA-DRB4X5D2U9 266 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 A0A1W2PRX2 142 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 FGF16O43320 207 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 C1QTNF5Q9BXJ0 243 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 HERV-K104P63124 156 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 TRPT1Q86TN4 253 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 TTTY12Q9BZ98 90 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 EXOC3-AS1Q8N2X6 119 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 CMC4P56277 68 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 CDPF1Q6NVV7 123 aa9.2□□□□□ -0.94
HDGFL3-201ENST00000299633 TRAV1-1A0A0B4J248 108 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 M0R1W7 72 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 PRRC2CQ9Y520 2896 aaKnown RBP9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 BMPERQ8N8U9 685 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 IGHMP01871 453 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 GFRA4Q9GZZ7 299 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 PAX8Q06710 450 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 ANKRD39Q53RE8 183 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 RNF183Q96D59 192 aa9.19□□□□□ -0.94
HDGFL3-201ENST00000299633 C21orf140B9A014 251 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 B9A039 149 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 C19orf48Q6RUI8 117 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 TM2D1Q9BX74 207 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 EIF4EBP2Q13542 120 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 CFHR4Q92496 578 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 MTORP42345 2549 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 SRRM4A7MD48 611 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 PRSS29PA6NIE9 313 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 PPP1R32Q7Z5V6 425 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 KLF14Q8TD94 323 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 SETD2Q9BYW2 2564 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 SH2D1AO60880 128 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 ATP5EP56381 51 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 VSIG2Q96IQ7 327 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 IGHV3OR16-10A0A075B7F0 116 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 C17orf98A8MV24 154 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 SPSB3Q6PJ21 355 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 A6NED7 52 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 NDUFB1O75438 58 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 MST1P26927 711 aa9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-201ENST00000299633 CCL25O15444 150 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 DEFB125Q8N687 156 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 LTBP1Q14766 1721 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 A0A087WWL8 130 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms