RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 NDUFA3O95167 84 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 HLA-DMBP28068 263 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 IGLV11-55A0A075B6I3 123 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 HSBP1L1C9JCN9 74 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 LOXL1Q08397 574 aaPredicted RBP15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 AMMECR1LQ6DCA0 310 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 ARPC1AQ92747 370 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 SRSF8Q9BRL6 282 aaKnown RBP15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 LYZL1Q6UWQ5 148 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 NPBQ8NG41 125 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 AAMDCQ9H7C9 122 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 AP5S1Q9NUS5 200 aa15.3■□□□□ 0.04
NKX6-1-201ENST00000295886 CELSR1Q9NYQ6 3014 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 PPBPP02775 128 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 CT45A10P0DMU9 189 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 MFAP4P55083 255 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 PRSS3P2Q8NHM4 247 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 RAB1BQ9H0U4 201 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 NCR2O95944 276 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 OR5AL1P0C617 328 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 CEACAM3P40198 252 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 IFI27P40305 119 aaPredicted RBP15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 OCIAD2Q56VL3 154 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 DEFB125Q8N687 156 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 TMEM191AQ9H0A3 160 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 C21orf62Q9NYP8 219 aa15.29■□□□□ 0.04
NKX6-1-201ENST00000295886 TRBV6-1A0A0K0K1D8 114 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 AMN1Q8IY45 258 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 TIMD4Q96H15 378 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 SNAI2O43623 268 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 SH2D1AO60880 128 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 TCTAP57738 103 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 FOXE3Q13461 319 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 LYPD1Q8N2G4 141 aa15.28■□□□□ 0.04
NKX6-1-201ENST00000295886 ODF3BA8MYP8 253 aa15.27■□□□□ 0.04
NKX6-1-201ENST00000295886 D6R8Y8 96 aa15.27■□□□□ 0.04
NKX6-1-201ENST00000295886 NDUFS7O75251 213 aa15.27■□□□□ 0.04
NKX6-1-201ENST00000295886 C12orf54Q6X4T0 127 aa15.27■□□□□ 0.04
NKX6-1-201ENST00000295886 VMO1Q7Z5L0 202 aa15.27■□□□□ 0.04
NKX6-1-201ENST00000295886 PRTN3P24158 256 aa15.27■□□□□ 0.03
NKX6-1-201ENST00000295886 FA2HQ7L5A8 372 aa15.27■□□□□ 0.03
NKX6-1-201ENST00000295886 TMEM189A5PLL7 270 aa15.26■□□□□ 0.03
NKX6-1-201ENST00000295886 ADORA2A-AS1P86434 159 aa15.26■□□□□ 0.03
NKX6-1-201ENST00000295886 ZNF562Q6V9R5 426 aa15.26■□□□□ 0.03
NKX6-1-201ENST00000295886 A0A087X0K7 114 aa15.26■□□□□ 0.03
NKX6-1-201ENST00000295886 VGLL1Q99990 258 aa15.26■□□□□ 0.03
NKX6-1-201ENST00000295886 HSPB8Q9UJY1 196 aa15.26■□□□□ 0.03
NKX6-1-201ENST00000295886 NPIPB5A8MRT5 1133 aa15.25■□□□□ 0.03
NKX6-1-201ENST00000295886 SMKR1H3BMG3 65 aa15.25■□□□□ 0.03
NKX6-1-201ENST00000295886 CSN1S1P47710 185 aa15.25■□□□□ 0.03
NKX6-1-201ENST00000295886 SCRT2Q9NQ03 307 aa15.25■□□□□ 0.03
NKX6-1-201ENST00000295886 ZFP36P26651 326 aaKnown RBP15.25■□□□□ 0.03
NKX6-1-201ENST00000295886 ZNF80P51504 273 aaPredicted RBP15.25■□□□□ 0.03
NKX6-1-201ENST00000295886 PSG9Q00887 426 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 PET117Q6UWS5 81 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 SMIM15Q7Z3B0 74 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 OR8A1Q8NGG7 326 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 ZNF747Q9BV97 191 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 CTSGP08311 255 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 EGR2P11161 476 aaPredicted RBP15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 RPS20P60866 119 aaKnown RBP15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 SMAD5-AS1Q9Y6J3 95 aa15.24■□□□□ 0.03
NKX6-1-201ENST00000295886 IGHV3-66A0A0C4DH42 116 aa15.23■□□□□ 0.03
NKX6-1-201ENST00000295886 FBXL19-AS1Q494R0 122 aa15.23■□□□□ 0.03
NKX6-1-201ENST00000295886 COL12A1Q99715 3063 aa15.23■□□□□ 0.03
NKX6-1-201ENST00000295886 A0A096LNJ9 63 aa15.23■□□□□ 0.03
NKX6-1-201ENST00000295886 SIGLEC8Q9NYZ4 499 aa15.23■□□□□ 0.03
NKX6-1-201ENST00000295886 VPS13CQ709C8 3753 aa15.23■□□□□ 0.03
NKX6-1-201ENST00000295886 IGHV3OR16-13A0A075B7E8 117 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 IGHV3-74A0A0B4J1X5 117 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 M0R1W7 72 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 TMEM11P17152 192 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 PDE6HQ13956 83 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 TTC9CQ8N5M4 171 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 PRR25Q96S07 402 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 LINC01545Q5VT33 79 aa15.22■□□□□ 0.03
NKX6-1-201ENST00000295886 TRAV8-6A0A0B4J262 113 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 GAGE12BA1L429 117 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 CD5LO43866 347 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 IGHG4P01861 327 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 OR10AG1Q8NH19 301 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 PRELID3AQ96N28 172 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 IGHV7-81A0A0B4J1V7 117 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 GPR183P32249 361 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 HIST1H1AQ02539 215 aaPredicted RBP15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 ECSCRQ19T08 205 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 MSRB1Q9NZV6 116 aa15.21■□□□□ 0.03
NKX6-1-201ENST00000295886 A0A1W2PPR1 153 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 ERCC8Q13216 396 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 FAM104BQ5XKR9 115 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 C11orf71Q6IPW1 123 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 RPL7P18124 248 aaKnown RBP15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 S100A7P31151 101 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 TWIST1Q15672 202 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 MRPL51Q4U2R6 128 aaKnown RBP15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 WFDC3Q8IUB2 231 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 GATD1Q8NB37 220 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 RABAC1Q9UI14 185 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 RAXQ9Y2V3 346 aa15.2■□□□□ 0.02
NKX6-1-201ENST00000295886 MAP1AP78559 2803 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms