RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HLA-DQA1P01909 254 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 CIARTQ8N365 385 aaPredicted RBP7.07□□□□□ -1.28
PDPN-201ENST00000294489 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 PACRGQ96M98 296 aaPredicted RBP7.07□□□□□ -1.28
PDPN-201ENST00000294489 HIST1H2BLQ99880 126 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 PRSS22Q9GZN4 317 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 ZNF785A8K8V0 405 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 HIGD1CA8MV81 97 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 BUB3O43684 328 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 BLCAPP62952 87 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 GBGT1Q8N5D6 347 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 TEX29Q8N6K0 151 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 NEU1Q99519 415 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 NIT2Q9NQR4 276 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 FBLL1A6NHQ2 334 aaKnown RBP7.06□□□□□ -1.28
PDPN-201ENST00000294489 CRISP2P16562 243 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 C1orf194Q5T5A4 169 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 TMEM136Q6ZRR5 245 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 Q6ZS46 218 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 OR4B1Q8NGF8 309 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 VPREB3Q9UKI3 123 aa7.06□□□□□ -1.28
PDPN-201ENST00000294489 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 TMEM89A2RUT3 159 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 FRMD6-AS1P0C7T7 363 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 ARL3P36405 182 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 LINC00322Q6ZN03 302 aaPredicted RBP7.05□□□□□ -1.28
PDPN-201ENST00000294489 TMEM18Q96B42 140 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 NOL4LQ96MY1 436 aaPredicted RBP7.05□□□□□ -1.28
PDPN-201ENST00000294489 SMAD5-AS1Q9Y6J3 95 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 PTPN13Q12923 2485 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 CT45A10P0DMU9 189 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 ATP5L2Q7Z4Y8 100 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 Q8N2B8 174 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 WIPF2Q8TF74 440 aaPredicted RBP7.05□□□□□ -1.28
PDPN-201ENST00000294489 GFRA4Q9GZZ7 299 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 DOPEY2Q9Y3R5 2298 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 A0A087X0K7 114 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 CLPSL1A2RUU4 121 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 FAM231BA6NCW3 169 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 AMBPP02760 352 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 PF4V1P10720 104 aa7.05□□□□□ -1.28
PDPN-201ENST00000294489 A0A0G2JLM5 398 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 GRIFINA4D1Z8 144 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 PYY3Q5JQD4 70 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 TMEM86BQ8N661 226 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 SLC50A1Q9BRV3 221 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
PDPN-201ENST00000294489 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.04□□□□□ -1.28
PDPN-201ENST00000294489 CHEK1O14757 476 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 CD5LO43866 347 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 APCSP02743 223 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 SAPCD1Q5SSQ6 148 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 OR2D3Q8NGH3 330 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
PDPN-201ENST00000294489 IGHV3-66A0A0C4DH42 116 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 POLQO75417 2590 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 NDUFA4O00483 81 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 ZNF207O43670 478 aaKnown RBP7.03□□□□□ -1.28
PDPN-201ENST00000294489 IGHG4P01861 327 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 Q0VG73 95 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 RBPMS2Q6ZRY4 209 aaKnown RBP7.03□□□□□ -1.28
PDPN-201ENST00000294489 ZNF702PQ9H963 129 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 U3KQE9 123 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 IGKV2-40A0A087WW87 121 aaPredicted RBP7.03□□□□□ -1.28
PDPN-201ENST00000294489 IGKV2D-40P01614 121 aaPredicted RBP7.03□□□□□ -1.28
PDPN-201ENST00000294489 CAMPP49913 170 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 HBBP68871 147 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 LCN12Q6JVE5 192 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
PDPN-201ENST00000294489 IGHV3OR16-13A0A075B7E8 117 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 IGHV3-74A0A0B4J1X5 117 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 PRB4P10163 310 aaPredicted RBP7.02□□□□□ -1.29
PDPN-201ENST00000294489 PSMB8P28062 276 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 OR10J3Q5JRS4 329 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 RNF152Q8N8N0 203 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 MYOZ3Q8TDC0 251 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 GTSF1Q8WW33 167 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 PGLYRP4Q96LB8 373 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 KLK15Q9H2R5 256 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 HELZ2Q9BYK8 2649 aaKnown RBP7.02□□□□□ -1.29
PDPN-201ENST00000294489 IGHV3-49A0A0A0MS15 119 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 HOXA3O43365 443 aaPredicted RBP7.02□□□□□ -1.29
PDPN-201ENST00000294489 IGHV3-11P01762 117 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 APOHP02749 345 aaPredicted RBP7.02□□□□□ -1.29
PDPN-201ENST00000294489 IGFL4Q6B9Z1 124 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 OR4X2Q8NGF9 303 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 NDFIP1Q9BT67 221 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 ABCA12Q86UK0 2595 aa7.02□□□□□ -1.29
PDPN-201ENST00000294489 ZANQ9Y493 2812 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 A0A1B0GUS0 222 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 A0A1B0GXF2 115 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms