RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ATP5G2Q06055 141 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 RBPMS2Q6ZRY4 209 aaKnown RBP10.85□□□□□ -0.67
NXF1-201ENST00000294172 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 ZFAND3Q9H8U3 227 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 A0A1B0GXF2 115 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 HLA-DMBP28068 263 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 S100A7P31151 101 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 KLK9Q2XQG4 91 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 KLK9Q9UKQ9 250 aa10.85□□□□□ -0.67
NXF1-201ENST00000294172 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 ZNF207O43670 478 aaKnown RBP10.84□□□□□ -0.67
NXF1-201ENST00000294172 GFRA4Q9GZZ7 299 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 FBN2P35556 2912 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 PTPN13Q12923 2485 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 B4DSR2 109 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 CHEK1O14757 476 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 GPX1P07203 203 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 CT45A10P0DMU9 189 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 PMCHP20382 165 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 CRIP1P50238 77 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 TDRG1Q3Y452 100 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 OR4B1Q8NGF8 309 aa10.84□□□□□ -0.67
NXF1-201ENST00000294172 BUB3O43684 328 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 AVPP01185 164 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 TRGV3P03979 118 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 TPPP3Q9BW30 176 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 UBR5O95071 2799 aaPredicted RBP10.83□□□□□ -0.68
NXF1-201ENST00000294172 ABCA12Q86UK0 2595 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 ZANQ9Y493 2812 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 KIR2DL5BA0A0G2JN68 375 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 KIR2DL5BA0A0G2JPC4 375 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 A0A1W2PS18 150 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 CLPSL1A2RUU4 121 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
NXF1-201ENST00000294172 COX6B1P14854 86 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 AMTP48728 403 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 KRTDAPP60985 99 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
NXF1-201ENST00000294172 LBHQ53QV2 105 aaPredicted RBP10.83□□□□□ -0.68
NXF1-201ENST00000294172 KIR2DL5AQ8N109 375 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 KCNS1Q96KK3 526 aa10.83□□□□□ -0.68
NXF1-201ENST00000294172 FAM231BA6NCW3 169 aa10.82□□□□□ -0.68
NXF1-201ENST00000294172 Q8TAT8 98 aa10.82□□□□□ -0.68
NXF1-201ENST00000294172 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 EREGO14944 169 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 BLCAPP62952 87 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 C16orf54Q6UWD8 224 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 ZNF843Q8N446 348 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 VGLL1Q99990 258 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 ALKBH7Q9BT30 221 aaPredicted RBP10.81□□□□□ -0.68
NXF1-201ENST00000294172 RNF114Q9Y508 228 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 IGHG4P01861 327 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 DSCR9P59020 149 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 LCN12Q6JVE5 192 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 TEX43Q6ZNM6 134 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 RNF182Q8N6D2 247 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 METTL26Q96S19 204 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 NRN1Q9NPD7 142 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 PAM16Q9Y3D7 125 aa10.81□□□□□ -0.68
NXF1-201ENST00000294172 A6NDX4 124 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 FAM223BA6NKX1 122 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 NTF3P20783 257 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 RAB9AP51151 201 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 FOXA3P55318 350 aaPredicted RBP10.8□□□□□ -0.68
NXF1-201ENST00000294172 ZNF705AQ6ZN79 300 aaPredicted RBP10.8□□□□□ -0.68
NXF1-201ENST00000294172 FAM223AQ8IWN6 122 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 SSTP61278 116 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 Q6ZS46 218 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 VAMP8Q9BV40 100 aa10.8□□□□□ -0.68
NXF1-201ENST00000294172 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
NXF1-201ENST00000294172 IGF1P05019 195 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 CRIP2P52943 208 aaPredicted RBP10.79□□□□□ -0.68
NXF1-201ENST00000294172 SRSF1Q07955 248 aaKnown RBP eCLIP10.79□□□□□ -0.68
NXF1-201ENST00000294172 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 PRR25Q96S07 402 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 NAV2Q8IVL1 2488 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 HAX1O00165 279 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 SH2D1AO60880 128 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 ARMS2P0C7Q2 107 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 SLC25A16P16260 332 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 ARL3P36405 182 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 FAM162BQ5T6X4 162 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.79□□□□□ -0.68
NXF1-201ENST00000294172 PRAC2D3DTV9 90 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 IGHV3-11P01762 117 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 IGHG2P01859 326 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 ERCC8Q13216 396 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
NXF1-201ENST00000294172 RNASEKQ6P5S7 137 aaKnown RBP10.78□□□□□ -0.68
NXF1-201ENST00000294172 A0A087X0K7 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms