RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 IGKV2-40A0A087WW87 121 aaPredicted RBP13.18□□□□□ -0.3
CHRNE-201ENST00000293780 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 IGKV2D-40P01614 121 aaPredicted RBP13.18□□□□□ -0.3
CHRNE-201ENST00000293780 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 IGFL4Q6B9Z1 124 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 VPS25Q9BRG1 176 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 ZNF747Q9BV97 191 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 ZFHX3Q15911 3703 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 LINC01545Q5VT33 79 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
CHRNE-201ENST00000293780 HRNRQ86YZ3 2850 aaPredicted RBP13.17□□□□□ -0.3
CHRNE-201ENST00000293780 PIEZO1Q92508 2521 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 CBY3A6NI87 242 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 D6R8Y8 96 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 CT45A10P0DMU9 189 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 MFAP4P55083 255 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 FXYD7P58549 80 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 WNK2Q9Y3S1 2297 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 IGF2RP11717 2491 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 IGHV3OR16-8A0A075B7F1 116 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
CHRNE-201ENST00000293780 SH2D1AO60880 128 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 RAB1BQ9H0U4 201 aa13.17□□□□□ -0.3
CHRNE-201ENST00000293780 A0A087X0K7 114 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 A0A096LNJ9 63 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 SNAI2O43623 268 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 OCIAD2Q56VL3 154 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 DEFB125Q8N687 156 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 AMMECR1LQ6DCA0 310 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
CHRNE-201ENST00000293780 ODF3BA8MYP8 253 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 K7ENP7 123 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 PDE6HQ13956 83 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 OR10AG1Q8NH19 301 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 IGHV3-35A0A0C4DH35 117 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 A0A1B0GW15 77 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 NPIPB5A8MRT5 1133 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 CEACAM3P40198 252 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 CSN1S1P47710 185 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 RPS20P60866 119 aaKnown RBP13.15□□□□□ -0.3
CHRNE-201ENST00000293780 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 Q8TAT8 98 aa13.15□□□□□ -0.3
CHRNE-201ENST00000293780 ZNF80P51504 273 aaPredicted RBP13.14□□□□□ -0.31
CHRNE-201ENST00000293780 Q6AWC8 147 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 C12orf54Q6X4T0 127 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
CHRNE-201ENST00000293780 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 TTC9CQ8N5M4 171 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 VGLL1Q99990 258 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 MS4A6AQ9H2W1 248 aa13.14□□□□□ -0.31
CHRNE-201ENST00000293780 SMKR1H3BMG3 65 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 PRTN3P24158 256 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 SMIM15Q7Z3B0 74 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 PRELID3AQ96N28 172 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 NCOR2Q9Y618 2525 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 CCL21O00585 134 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 MRPL51Q4U2R6 128 aaKnown RBP13.13□□□□□ -0.31
CHRNE-201ENST00000293780 PRR25Q96S07 402 aa13.13□□□□□ -0.31
CHRNE-201ENST00000293780 IGHG4P01861 327 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 CTSGP08311 255 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 U3KQK5 164 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 M0R1W7 72 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 TCTAP57738 103 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 PSG9Q00887 426 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 ZNF575Q86XF7 245 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 TIMD4Q96H15 378 aa13.12□□□□□ -0.31
CHRNE-201ENST00000293780 CACNA1BQ00975 2339 aa13.11□□□□□ -0.31
CHRNE-201ENST00000293780 C2orf91Q6ZV80 131 aa13.11□□□□□ -0.31
CHRNE-201ENST00000293780 VMO1Q7Z5L0 202 aa13.11□□□□□ -0.31
CHRNE-201ENST00000293780 ZNF48Q96MX3 618 aaPredicted RBP13.11□□□□□ -0.31
CHRNE-201ENST00000293780 COX8AP10176 69 aa13.11□□□□□ -0.31
CHRNE-201ENST00000293780 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
CHRNE-201ENST00000293780 CD5LO43866 347 aa13.1□□□□□ -0.31
CHRNE-201ENST00000293780 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
CHRNE-201ENST00000293780 TWIST1Q15672 202 aa13.1□□□□□ -0.31
CHRNE-201ENST00000293780 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
CHRNE-201ENST00000293780 S100A7AQ86SG5 101 aa13.1□□□□□ -0.31
CHRNE-201ENST00000293780 GPR183P32249 361 aa13.1□□□□□ -0.31
CHRNE-201ENST00000293780 Q8N6K4 173 aa13.1□□□□□ -0.31
CHRNE-201ENST00000293780 TRAV8-6A0A0B4J262 113 aa13.09□□□□□ -0.31
CHRNE-201ENST00000293780 GAGE12BA1L429 117 aa13.09□□□□□ -0.31
CHRNE-201ENST00000293780 ZFP36P26651 326 aaKnown RBP13.09□□□□□ -0.31
CHRNE-201ENST00000293780 HIST1H1AQ02539 215 aaPredicted RBP13.09□□□□□ -0.31
CHRNE-201ENST00000293780 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
CHRNE-201ENST00000293780 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
CHRNE-201ENST00000293780 IGHV7-81A0A0B4J1V7 117 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms