RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PMCHL2Q9BQD1 86 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 TMUB1Q9BVT8 246 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 A0A1B0GUT8 65 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 IGLV2-11P01706 119 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 PPBPP02775 128 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 CEACAM3P40198 252 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 ZNF138P52744 262 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 A0A1B0GW15 77 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 RIGQ13278 110 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 PRNTQ86SH4 94 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 CCL19Q99731 98 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 POLQO75417 2590 aa14.38□□□□□ -0.11
PDLIM3-201ENST00000284767 TRAV8-1A0A0A6YYK1 113 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 CNIH1O95406 144 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 COTL1Q14019 142 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 AP5S1Q9NUS5 200 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 OR2T8A6NH00 312 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 NBR2O15453 112 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 GOLT1AQ6ZVE7 132 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 SLC25A39Q9BZJ4 359 aaPredicted RBP14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 FBN2P35556 2912 aa14.37□□□□□ -0.11
PDLIM3-201ENST00000284767 COX8AP10176 69 aa14.36□□□□□ -0.11
PDLIM3-201ENST00000284767 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
PDLIM3-201ENST00000284767 F11RQ9Y624 299 aaKnown RBP14.36□□□□□ -0.11
PDLIM3-201ENST00000284767 GPR183P32249 361 aa14.36□□□□□ -0.11
PDLIM3-201ENST00000284767 LYZP61626 148 aa14.36□□□□□ -0.11
PDLIM3-201ENST00000284767 PSG1P11464 419 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 CSN1S1P47710 185 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 ERASQ7Z444 233 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 TMEM75Q8N9X5 138 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 ZNF747Q9BV97 191 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 CST9LQ9H4G1 147 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 H0Y8G0 127 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 CSN3P07498 182 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 IGLC1P0CG04 106 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 EXOC3-AS1Q8N2X6 119 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 RNF24Q9Y225 148 aa14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 UBR5O95071 2799 aaPredicted RBP14.35□□□□□ -0.11
PDLIM3-201ENST00000284767 CBY3A6NI87 242 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 NCBP2LA6PVI3 153 aaKnown RBP14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 RNF151Q2KHN1 245 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 KLF17Q5JT82 389 aaPredicted RBP14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 Q6AWC8 147 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 AMMECR1LQ6DCA0 310 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 OR10AG1Q8NH19 301 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 RNF5Q99942 180 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 IGHV3OR16-10A0A075B7F0 116 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 A0A087X0K7 114 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 IGHV4-61A0A0C4DH41 118 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 ARMS2P0C7Q2 107 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 DPF1Q92782 380 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 ZC2HC1AQ96GY0 325 aa14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 MCRIP2Q9BUT9 160 aaKnown RBP14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 PEF1Q9UBV8 284 aaKnown RBP14.34□□□□□ -0.11
PDLIM3-201ENST00000284767 FA2HQ7L5A8 372 aa14.33□□□□□ -0.11
PDLIM3-201ENST00000284767 ZNF843Q8N446 348 aa14.33□□□□□ -0.11
PDLIM3-201ENST00000284767 AJUBAQ96IF1 538 aa14.33□□□□□ -0.11
PDLIM3-201ENST00000284767 ZNF785A8K8V0 405 aa14.33□□□□□ -0.12
PDLIM3-201ENST00000284767 PSG9Q00887 426 aa14.33□□□□□ -0.12
PDLIM3-201ENST00000284767 OCIAD2Q56VL3 154 aa14.33□□□□□ -0.12
PDLIM3-201ENST00000284767 BPIFA4PQ86YQ2 179 aa14.33□□□□□ -0.12
PDLIM3-201ENST00000284767 S4R3C0 116 aa14.33□□□□□ -0.12
PDLIM3-201ENST00000284767 A1L4Q6 167 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 K7EQM0 130 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 NDUFA3O95167 84 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 NDPQ00604 133 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 SRSF1Q07955 248 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 C5orf64Q2M2E5 130 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 C2orf91Q6ZV80 131 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 NPBQ8NG41 125 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 RASL11BQ9BPW5 248 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 SAA4P35542 130 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 ATP5J2P56134 94 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 SEC11AP67812 179 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 LYPD1Q8N2G4 141 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 PRSS3P2Q8NHM4 247 aa14.32□□□□□ -0.12
PDLIM3-201ENST00000284767 TRBV19A0A075B6N1 114 aa14.31□□□□□ -0.12
PDLIM3-201ENST00000284767 TIMM8BQ9Y5J9 83 aaPredicted RBP14.31□□□□□ -0.12
PDLIM3-201ENST00000284767 IGHV4-30-2A0A087WSY4 118 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 I3L2K1 104 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 ZNF493Q6ZR52 646 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 Q71RC1 249 aaPredicted RBP14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 PSG8Q9UQ74 426 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 UBE2E1P51965 193 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 MINOS1Q5TGZ0 78 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 CCDC144NLQ6NUI1 221 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 SHANK2-AS3Q9BTD1 123 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 MINOS1-NBL1R4GNA1 71 aa14.3□□□□□ -0.12
PDLIM3-201ENST00000284767 TMEM11P17152 192 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 PSG3Q16557 428 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 TMEM97Q5BJF2 176 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 Q8N6K4 173 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 C10orf105Q8TEF2 133 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 PIMREGQ9BSJ6 248 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 TRAV8-6A0A0B4J262 113 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 C7orf71A4D174 169 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 H3BRN7 92 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 SIGLEC15Q6ZMC9 328 aa14.29□□□□□ -0.12
PDLIM3-201ENST00000284767 OR1N2Q8NGR9 330 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms