RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 JKAMPQ9P055 326 aa14.67□□□□□ -0.06
SSC4D-201ENST00000275560 ANKRD11Q6UB99 2663 aaPredicted RBP14.66□□□□□ -0.06
SSC4D-201ENST00000275560 IGHV1-3A0A0C4DH29 117 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 H3BRN7 92 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 M0R296 226 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 ZNF207O43670 478 aaKnown RBP14.66□□□□□ -0.06
SSC4D-201ENST00000275560 GCSHP23434 173 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 CKS2P33552 79 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 C1orf185Q5T7R7 199 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 SH3BGRL2Q9UJC5 107 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 K7EIM0 57 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 K7EQM0 130 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 FXYD2P54710 66 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 RBPJQ06330 500 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 PAX8Q06710 450 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 TWIST1Q15672 202 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 NEGR1Q7Z3B1 354 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 ZNF491Q8N8L2 437 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 NPFFR1Q9GZQ6 430 aa14.66□□□□□ -0.06
SSC4D-201ENST00000275560 LYNX1G3V0Z9 82 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 K7EM74 188 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 CNIH1O95406 144 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 LYNX1P0DP58 116 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 RPL24P83731 157 aaKnown RBP14.65□□□□□ -0.06
SSC4D-201ENST00000275560 TMEM108Q6UXF1 575 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 RNF125Q96EQ8 232 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 U3KQK5 164 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 SPAARA0A1B0GVQ0 90 aa14.65□□□□□ -0.06
SSC4D-201ENST00000275560 TNFRSF13BO14836 293 aaPredicted RBP14.65□□□□□ -0.06
SSC4D-201ENST00000275560 IGHV3OR16-8A0A075B7F1 116 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 EGR2P11161 476 aaPredicted RBP14.64□□□□□ -0.07
SSC4D-201ENST00000275560 ZNF80P51504 273 aaPredicted RBP14.64□□□□□ -0.07
SSC4D-201ENST00000275560 OR9G4Q8NGQ1 327 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 WI2-2373I1.2A0A1W2PRP0 233 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 NPIPB5A8MRT5 1133 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 MRPS12O15235 138 aaKnown RBP14.64□□□□□ -0.07
SSC4D-201ENST00000275560 IGHV3-23P01764 117 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 EVI2AP22794 236 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 NUP37Q8NFH4 326 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 DPF1Q92782 380 aa14.64□□□□□ -0.07
SSC4D-201ENST00000275560 CACNA1BQ00975 2339 aa14.63□□□□□ -0.07
SSC4D-201ENST00000275560 TRBV6-1A0A0K0K1D8 114 aa14.63□□□□□ -0.07
SSC4D-201ENST00000275560 A0A1B0GW15 77 aa14.63□□□□□ -0.07
SSC4D-201ENST00000275560 HLA-DMBP28068 263 aa14.63□□□□□ -0.07
SSC4D-201ENST00000275560 GATA1P15976 413 aaPredicted RBP14.63□□□□□ -0.07
SSC4D-201ENST00000275560 C3orf36Q3SXR2 165 aa14.63□□□□□ -0.07
SSC4D-201ENST00000275560 C8orf31Q8N9H6 132 aa14.63□□□□□ -0.07
SSC4D-201ENST00000275560 PPIFP30405 207 aaKnown RBP14.62□□□□□ -0.07
SSC4D-201ENST00000275560 SAMD5Q5TGI4 173 aa14.62□□□□□ -0.07
SSC4D-201ENST00000275560 TEX48A0A1B0GUV7 120 aa14.62□□□□□ -0.07
SSC4D-201ENST00000275560 Q6AWC8 147 aa14.62□□□□□ -0.07
SSC4D-201ENST00000275560 OR4X2Q8NGF9 303 aa14.62□□□□□ -0.07
SSC4D-201ENST00000275560 BUB1B-PAK6H3BSN5 160 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 GNG7O60262 68 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 IGLV1-47P01700 117 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 FABP2P12104 132 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 COLQQ9Y215 455 aaPredicted RBP14.61□□□□□ -0.07
SSC4D-201ENST00000275560 ACACAQ13085 2346 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 THBDP07204 575 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 DEFB124Q8NES8 71 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 VGLL1Q99990 258 aa14.61□□□□□ -0.07
SSC4D-201ENST00000275560 GTSCR1Q86UQ5 136 aa14.6□□□□□ -0.07
SSC4D-201ENST00000275560 IGHV3-35A0A0C4DH35 117 aa14.6□□□□□ -0.07
SSC4D-201ENST00000275560 LEPP41159 167 aa14.6□□□□□ -0.07
SSC4D-201ENST00000275560 RPEQ96AT9 228 aa14.6□□□□□ -0.07
SSC4D-201ENST00000275560 AGRNO00468 2067 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 ZFHX3Q15911 3703 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 ZNF575Q86XF7 245 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 AAMDCQ9H7C9 122 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 ABCA4P78363 2273 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 SMIM13P0DJ93 91 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 DYNLRB1Q9NP97 96 aa14.59□□□□□ -0.07
SSC4D-201ENST00000275560 SPTBN2O15020 2390 aa14.58□□□□□ -0.07
SSC4D-201ENST00000275560 PPIAL4CA0A0B4J2A2 164 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 SIVA1O15304 175 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 PRSS1P07477 247 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 PPIAL4GP0DN37 164 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 GFRALQ6UXV0 394 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 MTURNQ8N3F0 131 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 RNASE6Q93091 150 aaKnown RBP14.58□□□□□ -0.08
SSC4D-201ENST00000275560 COL25A1Q9BXS0 654 aaPredicted RBP14.58□□□□□ -0.08
SSC4D-201ENST00000275560 NHP2Q9NX24 153 aaKnown RBP14.58□□□□□ -0.08
SSC4D-201ENST00000275560 HHLA3Q9XRX5 114 aa14.58□□□□□ -0.08
SSC4D-201ENST00000275560 C16orf97H3BN30 126 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 ODF1Q14990 250 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 ZNF562Q6V9R5 426 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 PRR25Q96S07 402 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 CHAC1Q9BUX1 264 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 GTSF1LQ9H1H1 148 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 MED13LQ71F56 2210 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 A0A0G2JNJ9 132 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 TIMM23O14925 209 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 LYPD1Q8N2G4 141 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 OR5A1Q8NGJ0 315 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 RNF185Q96GF1 192 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 Q9UFV3 132 aa14.57□□□□□ -0.08
SSC4D-201ENST00000275560 ORM1P02763 201 aa14.56□□□□□ -0.08
SSC4D-201ENST00000275560 FOXC2Q99958 501 aa14.56□□□□□ -0.08
SSC4D-201ENST00000275560 ERCC8Q13216 396 aa14.55□□□□□ -0.08
SSC4D-201ENST00000275560 ASCL5Q7RTU5 278 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms