RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 M0R1B8 84 aa13.59□□□□□ -0.23
LRRC56-201ENST00000270115 MRAP2Q96G30 205 aa13.59□□□□□ -0.23
LRRC56-201ENST00000270115 A0A1B0GWB2 263 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM164Q5U3C3 297 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 FOXC2Q99958 501 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 NPIPB5A8MRT5 1133 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 PRRG2O14669 202 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 IGKCP01834 107 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 Q6AWC8 147 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 MAPKAPK5-AS1Q8N8E1 139 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM75Q8N9X5 138 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 PLSCR4Q9NRQ2 329 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM160Q9NX00 188 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 ROS1P08922 2347 aa13.58□□□□□ -0.24
LRRC56-201ENST00000270115 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
LRRC56-201ENST00000270115 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
LRRC56-201ENST00000270115 ZNF71Q9NQZ8 489 aaPredicted RBP13.57□□□□□ -0.24
LRRC56-201ENST00000270115 EVI2AP22794 236 aa13.57□□□□□ -0.24
LRRC56-201ENST00000270115 FAM169BQ8N8A8 192 aa13.57□□□□□ -0.24
LRRC56-201ENST00000270115 TRBV19A0A075B6N1 114 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 VMA21Q3ZAQ7 101 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 NGBQ9NPG2 151 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 MSRB1Q9NZV6 116 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 MAP1BP46821 2468 aaKnown RBP13.56□□□□□ -0.24
LRRC56-201ENST00000270115 TM4SF5O14894 197 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 CNTFRP26992 372 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 TNFAIP6P98066 277 aaPredicted RBP13.56□□□□□ -0.24
LRRC56-201ENST00000270115 LINC00574Q9H8X3 128 aa13.56□□□□□ -0.24
LRRC56-201ENST00000270115 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM8BA6NDV4 472 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 SH2D1AO60880 128 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 MC5RP33032 325 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 MRGPRG-AS1Q2M3A8 158 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 SIGLEC15Q6ZMC9 328 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 TRAV40A0A0B4J280 105 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 DEFB124Q8NES8 71 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 FER1L6-AS2Q96M78 137 aa13.55□□□□□ -0.24
LRRC56-201ENST00000270115 APOMO95445 188 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 SYT8Q8NBV8 401 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 HIST1H4GQ99525 98 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM14CQ9P0S9 112 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 LINC00312Q9Y6C7 94 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
LRRC56-201ENST00000270115 RASL11BQ9BPW5 248 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 GATA1P15976 413 aaPredicted RBP13.54□□□□□ -0.24
LRRC56-201ENST00000270115 PRB3Q04118 309 aaPredicted RBP13.54□□□□□ -0.24
LRRC56-201ENST00000270115 SRSF6Q13247 344 aaKnown RBP13.54□□□□□ -0.24
LRRC56-201ENST00000270115 KLF17Q5JT82 389 aaPredicted RBP13.54□□□□□ -0.24
LRRC56-201ENST00000270115 C1orf162Q8NEQ5 155 aaPredicted RBP13.54□□□□□ -0.24
LRRC56-201ENST00000270115 MAP1LC3AQ9H492 121 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 ZMAT4Q9H898 229 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 PRO0461Q9UI25 63 aa13.54□□□□□ -0.24
LRRC56-201ENST00000270115 ZNF48Q96MX3 618 aaPredicted RBP13.53□□□□□ -0.24
LRRC56-201ENST00000270115 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
LRRC56-201ENST00000270115 TRBV6-1A0A0K0K1D8 114 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 DPM2O94777 84 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 SPINK8P0C7L1 97 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM178AQ8NBL3 297 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 PIFOQ8TCI5 191 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 MUC6Q6W4X9 2439 aa13.53□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM200BQ69YZ2 307 aa13.52□□□□□ -0.24
LRRC56-201ENST00000270115 ZNF502Q8TBZ5 544 aa13.52□□□□□ -0.24
LRRC56-201ENST00000270115 TMEM158Q8WZ71 300 aa13.52□□□□□ -0.24
LRRC56-201ENST00000270115 SCNM1Q9BWG6 230 aa13.52□□□□□ -0.24
LRRC56-201ENST00000270115 MT-ATP8P03928 68 aa13.52□□□□□ -0.25
LRRC56-201ENST00000270115 C8orf86Q6ZUL3 223 aa13.52□□□□□ -0.25
LRRC56-201ENST00000270115 SLC25A15Q9Y619 301 aa13.52□□□□□ -0.25
LRRC56-201ENST00000270115 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.25
LRRC56-201ENST00000270115 J3KRW8 73 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 IGHV1-46P01743 117 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 EGR2P11161 476 aaPredicted RBP13.51□□□□□ -0.25
LRRC56-201ENST00000270115 GATA3P23771 443 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 CCL8P80075 99 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 DMXL2Q8TDJ6 3036 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 ZZEF1O43149 2961 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 ZNF292O60281 2723 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 DLX1P56177 255 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 TTC9CQ8N5M4 171 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 MRPL35Q9NZE8 188 aaKnown RBP13.51□□□□□ -0.25
LRRC56-201ENST00000270115 S4R3C0 116 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 MGAQ8IWI9 3026 aa13.51□□□□□ -0.25
LRRC56-201ENST00000270115 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
LRRC56-201ENST00000270115 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
LRRC56-201ENST00000270115 GLMPQ8WWB7 406 aa13.5□□□□□ -0.25
LRRC56-201ENST00000270115 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
LRRC56-201ENST00000270115 Q8TAT8 98 aa13.5□□□□□ -0.25
LRRC56-201ENST00000270115 CDIP1Q9H305 208 aa13.5□□□□□ -0.25
LRRC56-201ENST00000270115 FCN3O75636 299 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 IGKV1-17P01599 117 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 FOXI1Q12951 378 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 GVINP1Q7Z2Y8 2422 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 NDUFA3O95167 84 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 TMEM30BQ3MIR4 351 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 RNF185Q96GF1 192 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 SHANK2-AS3Q9BTD1 123 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 CEP250Q9BV73 2442 aa13.49□□□□□ -0.25
LRRC56-201ENST00000270115 TNFRSF6BO95407 300 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms