RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ORMDL3Q8N138 153 aa21.57■■□□□ 1.04
CBX4-201ENST00000269397 WNK2Q9Y3S1 2297 aa21.57■■□□□ 1.04
CBX4-201ENST00000269397 RPS20P60866 119 aaKnown RBP21.57■■□□□ 1.04
CBX4-201ENST00000269397 Q6AWC8 147 aa21.57■■□□□ 1.04
CBX4-201ENST00000269397 Q8TAT8 98 aa21.57■■□□□ 1.04
CBX4-201ENST00000269397 GAGE10A6NGK3 116 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 IGHV3-23P01764 117 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 AAMDCQ9H7C9 122 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 ONECUT1Q9UBC0 465 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 GNG7O60262 68 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 LYPD1Q8N2G4 141 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 JMJD8Q96S16 334 aa21.56■■□□□ 1.04
CBX4-201ENST00000269397 SAP30O75446 220 aa21.55■■□□□ 1.04
CBX4-201ENST00000269397 RAB37Q96AX2 223 aa21.55■■□□□ 1.04
CBX4-201ENST00000269397 ZNF292O60281 2723 aa21.55■■□□□ 1.04
CBX4-201ENST00000269397 NPYP01303 97 aa21.54■■□□□ 1.04
CBX4-201ENST00000269397 S100A7P31151 101 aa21.54■■□□□ 1.04
CBX4-201ENST00000269397 SEC11AP67812 179 aa21.54■■□□□ 1.04
CBX4-201ENST00000269397 H3BUT2 72 aa21.54■■□□□ 1.04
CBX4-201ENST00000269397 GFRALQ6UXV0 394 aa21.54■■□□□ 1.04
CBX4-201ENST00000269397 PCP2Q8IVA1 136 aa21.54■■□□□ 1.04
CBX4-201ENST00000269397 NMUP48645 174 aa21.53■■□□□ 1.04
CBX4-201ENST00000269397 IGHV3OR16-8A0A075B7F1 116 aa21.53■■□□□ 1.04
CBX4-201ENST00000269397 TWIST1Q15672 202 aa21.53■■□□□ 1.04
CBX4-201ENST00000269397 C18orf15Q96N68 181 aa21.53■■□□□ 1.04
CBX4-201ENST00000269397 NPIPB5A8MRT5 1133 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 EGR2P11161 476 aaPredicted RBP21.52■■□□□ 1.04
CBX4-201ENST00000269397 CKS2P33552 79 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 AP1S3Q96PC3 154 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 U3KQK5 164 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 WI2-2373I1.2A0A1W2PRP0 233 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 LGALS9BQ3B8N2 356 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 LGALS9CQ6DKI2 356 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 BOD1L2Q8IYS8 172 aa21.52■■□□□ 1.04
CBX4-201ENST00000269397 HBDP02042 147 aa21.52■■□□□ 1.03
CBX4-201ENST00000269397 DKK2Q9UBU2 259 aa21.52■■□□□ 1.03
CBX4-201ENST00000269397 ZNF80P51504 273 aaPredicted RBP21.51■■□□□ 1.03
CBX4-201ENST00000269397 TM4SF20Q53R12 229 aa21.51■■□□□ 1.03
CBX4-201ENST00000269397 MSRB1Q9NZV6 116 aa21.51■■□□□ 1.03
CBX4-201ENST00000269397 LY6LH3BQJ8 138 aa21.51■■□□□ 1.03
CBX4-201ENST00000269397 HLA-DMBP28068 263 aa21.51■■□□□ 1.03
CBX4-201ENST00000269397 HES1Q14469 280 aa21.51■■□□□ 1.03
CBX4-201ENST00000269397 IFI27L1Q96BM0 104 aa21.51■■□□□ 1.03
CBX4-201ENST00000269397 ZFHX2Q9C0A1 2572 aaPredicted RBP21.5■■□□□ 1.03
CBX4-201ENST00000269397 A1L4Q6 167 aa21.5■■□□□ 1.03
CBX4-201ENST00000269397 SMAD7O15105 426 aaKnown RBP21.5■■□□□ 1.03
CBX4-201ENST00000269397 GAS8-AS1O95177 125 aa21.5■■□□□ 1.03
CBX4-201ENST00000269397 KIR3DS1Q14943 382 aa21.5■■□□□ 1.03
CBX4-201ENST00000269397 ASH1LQ9NR48 2969 aaKnown RBP21.5■■□□□ 1.03
CBX4-201ENST00000269397 NBR2O15453 112 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 LY6HO94772 140 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 VGLL1Q99990 258 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 IGHV3-35A0A0C4DH35 117 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 ARL6IP6Q8N6S5 226 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 MEGF9Q9H1U4 602 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 CACNA1BQ00975 2339 aa21.49■■□□□ 1.03
CBX4-201ENST00000269397 C9orf118A6NHY6 69 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 PAX8Q06710 450 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 KLRD1Q13241 179 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 ABHD17AQ96GS6 310 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 PRR25Q96S07 402 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 JKAMPQ9P055 326 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 K7ERU9 68 aa21.48■■□□□ 1.03
CBX4-201ENST00000269397 A6NDN8 102 aa21.47■■□□□ 1.03
CBX4-201ENST00000269397 NDUFS7O75251 213 aa21.47■■□□□ 1.03
CBX4-201ENST00000269397 OR1N2Q8NGR9 330 aa21.47■■□□□ 1.03
CBX4-201ENST00000269397 FANCD2OSQ96PS1 177 aa21.47■■□□□ 1.03
CBX4-201ENST00000269397 MED13LQ71F56 2210 aa21.47■■□□□ 1.03
CBX4-201ENST00000269397 PRR30Q53SZ7 412 aaPredicted RBP21.47■■□□□ 1.03
CBX4-201ENST00000269397 UFSP1Q6NVU6 142 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 IGF2-ASQ6U949 168 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 FER1L6-AS1Q8NA97 138 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 DPF1Q92782 380 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.46■■□□□ 1.03
CBX4-201ENST00000269397 F8W735 103 aaPredicted RBP21.46■■□□□ 1.03
CBX4-201ENST00000269397 H3BRM9 83 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 ADAMTSL5Q6ZMM2 481 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 TTTY13Q9BZ97 58 aa21.46■■□□□ 1.03
CBX4-201ENST00000269397 RIPPLY3P57055 190 aa21.45■■□□□ 1.02
CBX4-201ENST00000269397 PDE6HQ13956 83 aa21.45■■□□□ 1.02
CBX4-201ENST00000269397 SMIM15Q7Z3B0 74 aa21.45■■□□□ 1.02
CBX4-201ENST00000269397 A0A0G2JLM5 398 aa21.45■■□□□ 1.02
CBX4-201ENST00000269397 RNF5Q99942 180 aa21.44■■□□□ 1.02
CBX4-201ENST00000269397 MFAP4P55083 255 aa21.44■■□□□ 1.02
CBX4-201ENST00000269397 HSD52Q0P140 79 aa21.44■■□□□ 1.02
CBX4-201ENST00000269397 SRSF8Q9BRL6 282 aaKnown RBP21.44■■□□□ 1.02
CBX4-201ENST00000269397 ORM1P02763 201 aa21.43■■□□□ 1.02
CBX4-201ENST00000269397 PPIFP30405 207 aaKnown RBP21.43■■□□□ 1.02
CBX4-201ENST00000269397 GTF2H5Q6ZYL4 71 aa21.43■■□□□ 1.02
CBX4-201ENST00000269397 RAB1BQ9H0U4 201 aa21.43■■□□□ 1.02
CBX4-201ENST00000269397 TLN1Q9Y490 2541 aaKnown RBP21.43■■□□□ 1.02
CBX4-201ENST00000269397 EVI2AP22794 236 aa21.43■■□□□ 1.02
CBX4-201ENST00000269397 NDPQ00604 133 aa21.43■■□□□ 1.02
CBX4-201ENST00000269397 ZNF575Q86XF7 245 aa21.43■■□□□ 1.02
CBX4-201ENST00000269397 B9A039 149 aa21.42■■□□□ 1.02
CBX4-201ENST00000269397 LINC01560Q8TB33 94 aa21.42■■□□□ 1.02
CBX4-201ENST00000269397 ANKHD1Q8IWZ3 2542 aaKnown RBP21.42■■□□□ 1.02
CBX4-201ENST00000269397 CFHR4Q92496 578 aa21.42■■□□□ 1.02
CBX4-201ENST00000269397 Q8NA96 180 aa21.42■■□□□ 1.02
CBX4-201ENST00000269397 OR9G4Q8NGQ1 327 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms