RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ERCC8Q13216 396 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 TEX36Q5VZQ5 186 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 POLQO75417 2590 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 NDPQ00604 133 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 IGHV3-11P01762 117 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 TMEM219Q86XT9 240 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 GOSR1O95249 250 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 ATP5L2Q7Z4Y8 100 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 NUP37Q8NFH4 326 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 IGKV3-20P01619 116 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 EPG5Q9HCE0 2579 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 C16orf92Q96LL3 132 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 FOXC2Q99958 501 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 COX11Q9Y6N1 276 aa12.86□□□□□ -0.35
PDZRN3-201ENST00000263666 CCL25O15444 150 aa12.85□□□□□ -0.35
PDZRN3-201ENST00000263666 NDUFS7O75251 213 aa12.85□□□□□ -0.35
PDZRN3-201ENST00000263666 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
PDZRN3-201ENST00000263666 MAP1LC3AQ9H492 121 aa12.85□□□□□ -0.35
PDZRN3-201ENST00000263666 SH2D1AO60880 128 aa12.85□□□□□ -0.35
PDZRN3-201ENST00000263666 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
PDZRN3-201ENST00000263666 COTL1Q14019 142 aa12.84□□□□□ -0.35
PDZRN3-201ENST00000263666 NAV2Q8IVL1 2488 aa12.84□□□□□ -0.35
PDZRN3-201ENST00000263666 A6NDN8 102 aa12.84□□□□□ -0.35
PDZRN3-201ENST00000263666 NEU4Q8WWR8 484 aaPredicted RBP12.84□□□□□ -0.35
PDZRN3-201ENST00000263666 SRD5A1P18405 259 aa12.84□□□□□ -0.35
PDZRN3-201ENST00000263666 UBE2V1Q13404 147 aa12.84□□□□□ -0.35
PDZRN3-201ENST00000263666 BMI1P35226 326 aa12.83□□□□□ -0.35
PDZRN3-201ENST00000263666 LEPP41159 167 aa12.83□□□□□ -0.35
PDZRN3-201ENST00000263666 RIPPLY3P57055 190 aa12.83□□□□□ -0.35
PDZRN3-201ENST00000263666 BCL6BQ8N143 479 aaPredicted RBP12.83□□□□□ -0.35
PDZRN3-201ENST00000263666 CENPEQ02224 2701 aa12.83□□□□□ -0.36
PDZRN3-201ENST00000263666 FAM120AOSQ5T036 256 aa12.83□□□□□ -0.36
PDZRN3-201ENST00000263666 FAM231DQ6ZW35 169 aa12.83□□□□□ -0.36
PDZRN3-201ENST00000263666 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
PDZRN3-201ENST00000263666 CHCHD1Q96BP2 118 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-201ENST00000263666 C1RLQ9NZP8 487 aa12.83□□□□□ -0.36
PDZRN3-201ENST00000263666 NDUFB8O95169 186 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 IGKV1-17P01599 117 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 IGLV2-23P01705 113 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 RHOGP84095 191 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 PSG3Q16557 428 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 FAM71F2Q6NXP2 309 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 ST20Q9HBF5 79 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 C15orf32Q32M92 178 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 TMEM97Q5BJF2 176 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 VWC2LB2RUY7 222 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 ZNF502Q8TBZ5 544 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 SOX21Q9Y651 276 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-201ENST00000263666 PF4V1P10720 104 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 PET117Q6UWS5 81 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 GTF2H5Q6ZYL4 71 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 ARL6IP6Q8N6S5 226 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 K7EMI3 77 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 GP9P14770 177 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 THAP8Q8NA92 274 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 MYOZ3Q8TDC0 251 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 FAM106CPP0CH98 169 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 C5orf64Q2M2E5 130 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 FAM106AQ4KMX7 169 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 Q8NA96 180 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 SHANK2-AS3Q9BTD1 123 aa12.81□□□□□ -0.36
PDZRN3-201ENST00000263666 NDUFA3O95167 84 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 GTSCR1Q86UQ5 136 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 AKAP13Q12802 2813 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 K7ERU9 68 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 SAPCD1Q5SSQ6 148 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 PVRIGQ6DKI7 326 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 VGLL1Q99990 258 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 G3V318 75 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 DLX6P56179 175 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 PSG9Q00887 426 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 TTTY13Q9BZ97 58 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 ABCA2Q9BZC7 2435 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 PEF1Q9UBV8 284 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-201ENST00000263666 HBDP02042 147 aa12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 GATA1P15976 413 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 TMEM8BA6NDV4 472 aa12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 SHISA9B4DS77 424 aa12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 LOXL1Q08397 574 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 VMO1Q7Z5L0 202 aa12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 ZNF491Q8N8L2 437 aa12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 MRPS16Q9Y3D3 137 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-201ENST00000263666 LTAP01374 205 aa12.78□□□□□ -0.36
PDZRN3-201ENST00000263666 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.78□□□□□ -0.36
PDZRN3-201ENST00000263666 METTL26Q96S19 204 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms