RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CHEK1O14757 476 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 ACANP16112 2415 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 IGKV2-40A0A087WW87 121 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-201ENST00000263559 C19orf71A6NCJ1 209 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 IGKV2D-40P01614 121 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-201ENST00000263559 ACTL10Q5JWF8 245 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 GLMPQ8WWB7 406 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 ZFP30Q9Y2G7 519 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
VPS26A-201ENST00000263559 FASNP49327 2511 aaKnown RBP12.09□□□□□ -0.47
VPS26A-201ENST00000263559 FRMD6-AS1P0C7T7 363 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 NDUFA6P56556 154 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 FABP9Q0Z7S8 132 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 Q8N2B8 174 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 ZNF492Q9P255 531 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 SERTM2A0A1B0GWG4 89 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 SPINK4O60575 86 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 FOXE3Q13461 319 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 LCN12Q6JVE5 192 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 RNF182Q8N6D2 247 aa12.08□□□□□ -0.48
VPS26A-201ENST00000263559 ELANEP08246 267 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 TMEM86BQ8N661 226 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 ZC2HC1AQ96GY0 325 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 SLC50A1Q9BRV3 221 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 UBE2CO00762 179 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 TM4SF20Q53R12 229 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 TRAPPC1Q9Y5R8 145 aa12.07□□□□□ -0.48
VPS26A-201ENST00000263559 TRAV8-2A0A0B4J237 113 aa12.06□□□□□ -0.48
VPS26A-201ENST00000263559 C8orf86Q6ZUL3 223 aa12.06□□□□□ -0.48
VPS26A-201ENST00000263559 DAZAP1Q96EP5 407 aaKnown RBP12.06□□□□□ -0.48
VPS26A-201ENST00000263559 VGLL1Q99990 258 aa12.06□□□□□ -0.48
VPS26A-201ENST00000263559 P01737 135 aa12.06□□□□□ -0.48
VPS26A-201ENST00000263559 MYOZ3Q8TDC0 251 aa12.06□□□□□ -0.48
VPS26A-201ENST00000263559 C8orf49Q96NF6 230 aa12.06□□□□□ -0.48
VPS26A-201ENST00000263559 RPP21Q9H633 154 aaKnown RBP12.06□□□□□ -0.48
VPS26A-201ENST00000263559 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 FAM106AQ4KMX7 169 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 GBGT1Q8N5D6 347 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 A0A1W2PS18 150 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 IZUMO1RA6ND01 250 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 FAM181BA6NEQ2 426 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 DNAJC9-AS1A6NH13 148 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 CBLN1P23435 193 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 MEOX2P50222 304 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 GPHB5Q86YW7 130 aa12.05□□□□□ -0.48
VPS26A-201ENST00000263559 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
VPS26A-201ENST00000263559 IGHV7-4-1A0A0J9YVY3 117 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 CRIP1P50238 77 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 RNF152Q8N8N0 203 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 NEU1Q99519 415 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 EDN2P20800 178 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 AKR1D1P51857 326 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 NUP35Q8NFH5 326 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 UBE2E2Q96LR5 201 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 RHPN1-AS1Q9BWJ2 59 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 ESM1Q9NQ30 184 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 ANK3Q12955 4377 aaKnown RBP12.04□□□□□ -0.48
VPS26A-201ENST00000263559 NPIPB6E9PJ23 425 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 HOXA5P20719 270 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 SMUG1Q53HV7 270 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 MRPL54Q6P161 138 aaKnown RBP12.04□□□□□ -0.48
VPS26A-201ENST00000263559 Q8TAT8 98 aa12.04□□□□□ -0.48
VPS26A-201ENST00000263559 K7EMT4 169 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
VPS26A-201ENST00000263559 PRR25Q96S07 402 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 ERCC8Q13216 396 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 CT83Q5H943 113 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 TCF24Q7RTU0 167 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 KLHDC1Q8N7A1 406 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 C16orf92Q96LL3 132 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 SMPXQ9UHP9 88 aa12.03□□□□□ -0.48
VPS26A-201ENST00000263559 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.48
VPS26A-201ENST00000263559 FBLL1A6NHQ2 334 aaKnown RBP12.02□□□□□ -0.49
VPS26A-201ENST00000263559 A8MWL6 223 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
VPS26A-201ENST00000263559 Q6ZSV7 163 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 SELENOKQ9Y6D0 94 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 SNURFLB1AK76 121 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 SAPCD1Q5SSQ6 148 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.49
VPS26A-201ENST00000263559 IGHV4OR15-8A0A075B7B6 117 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 A0A087WW49 117 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
VPS26A-201ENST00000263559 OR4B1Q8NGF8 309 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 SMR3AQ99954 134 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
VPS26A-201ENST00000263559 RBAKDNA6NC62 111 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 CT45A10P0DMU9 189 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
VPS26A-201ENST00000263559 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 UFC1Q9Y3C8 167 aa12.01□□□□□ -0.49
VPS26A-201ENST00000263559 GZMBP10144 247 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms