RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 CNIH1O95406 144 aa11.82□□□□□ -0.52
SLC40A1-201ENST00000261024 PAX8Q06710 450 aa11.82□□□□□ -0.52
SLC40A1-201ENST00000261024 FAM216BQ8N7L0 139 aa11.82□□□□□ -0.52
SLC40A1-201ENST00000261024 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
SLC40A1-201ENST00000261024 DIAPH2-AS1Q14236 149 aa11.81□□□□□ -0.52
SLC40A1-201ENST00000261024 MRPS17Q9Y2R5 130 aaKnown RBP11.81□□□□□ -0.52
SLC40A1-201ENST00000261024 NDUFA3O95167 84 aa11.81□□□□□ -0.52
SLC40A1-201ENST00000261024 SLC25A39Q9BZJ4 359 aaPredicted RBP11.81□□□□□ -0.52
SLC40A1-201ENST00000261024 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
SLC40A1-201ENST00000261024 FAM90A27PA6NNH2 459 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 ENSAO43768 121 aaKnown RBP11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 TGFAP01135 160 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 RBP4P02753 201 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 CFIP05156 583 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 GAGE5Q13069 117 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 GAGE6Q13070 117 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 GATD1Q8NB37 220 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 U3KQK5 164 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 IGHV3-72A0A0B4J1Y9 119 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 IGFBP4P22692 258 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 OR10X1Q8NGY0 326 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 MSRB1Q9NZV6 116 aa11.8□□□□□ -0.52
SLC40A1-201ENST00000261024 H3BVH4 76 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 MZT1Q08AG7 82 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 TRGV9Q99603 122 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 IL4P05112 153 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 HERV-K104P63124 156 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 OR4C13Q8NGP0 309 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 RPEQ96AT9 228 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 PLCE1Q9P212 2302 aa11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
SLC40A1-201ENST00000261024 LINC01548A6NM66 108 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 NCBP2LA6PVI3 153 aaKnown RBP11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 GATA1P15976 413 aaPredicted RBP11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 ZGRF1Q86YA3 2104 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 IGKV3-15P01624 115 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 TEX29Q8N6K0 151 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 TMEM167AQ8TBQ9 72 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 DLX4Q92988 240 aaPredicted RBP11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 SPRR3Q9UBC9 169 aa11.78□□□□□ -0.52
SLC40A1-201ENST00000261024 PIFOQ8TCI5 191 aa11.77□□□□□ -0.52
SLC40A1-201ENST00000261024 ZMAT4Q9H898 229 aa11.77□□□□□ -0.52
SLC40A1-201ENST00000261024 SH2D1AO60880 128 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 ZFAND6Q6FIF0 208 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 LOC400499M0QZD8 3231 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 TRGV5A0A0B4J1U4 118 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 CCL3L1P16619 93 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 MSMPQ1L6U9 139 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 SMIM20Q8N5G0 67 aa11.77□□□□□ -0.53
SLC40A1-201ENST00000261024 ZFP2Q6ZN57 461 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 RITA1Q96K30 269 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 SRSF6Q13247 344 aaKnown RBP11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 NGBQ9NPG2 151 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 POLEQ07864 2286 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 TRBV20-1A0A075B6N2 111 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
SLC40A1-201ENST00000261024 K7ESF4 209 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 C6orf15Q6UXA7 325 aaPredicted RBP11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 Q6ZT83 130 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 RASL11BQ9BPW5 248 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 TNFRSF6BO95407 300 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 ZNF833PQ6ZTB9 187 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 KALRNO60229 2985 aa11.75□□□□□ -0.53
SLC40A1-201ENST00000261024 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 ATP5LO75964 103 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 TAL2Q16559 108 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 ZNF71Q9NQZ8 489 aaPredicted RBP11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 SPENQ96T58 3664 aaKnown RBP11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 A6NJY4 79 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 HOXB4P17483 251 aaPredicted RBP11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 VMA21Q3ZAQ7 101 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 Q8TAT8 98 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 MYOZ3Q8TDC0 251 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 TRBV7-9A0A0J9YWB2 115 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 SCNM1Q9BWG6 230 aa11.74□□□□□ -0.53
SLC40A1-201ENST00000261024 IGHV1-18A0A0C4DH31 117 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 INS-IGF2F8WCM5 200 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 ORM1P02763 201 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 EGR2P11161 476 aaPredicted RBP11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 IGKV2-40A0A087WW87 121 aaPredicted RBP11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 IGKV2D-40P01614 121 aaPredicted RBP11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 PPDPFLQ8WWR9 84 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 CRYGCP07315 174 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 CARD19Q96LW7 228 aa11.73□□□□□ -0.53
SLC40A1-201ENST00000261024 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms