RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 COL6A5A8TX70 2615 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 FAM181BA6NEQ2 426 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 PRM2P04554 102 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 GP9P14770 177 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 RAB4AP20338 218 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 TWIST1Q15672 202 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 GDF5OSQ5U4N7 250 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 C1orf122Q6ZSJ8 110 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 LINC00173Q6ZV60 143 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 ZNF738Q8NE65 137 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 OR11H6Q8NGC7 330 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 Q96MF0 132 aa7.09□□□□□ -1.27
CKAP2-201ENST00000258607 TRAV41A0A0B4J266 112 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 M0R2Z0 102 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 MSMBP08118 114 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 MAS1LP35410 378 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 ARL3P36405 182 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
CKAP2-201ENST00000258607 LY6LH3BQJ8 138 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 M0R381 172 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 HIST1H1EP10412 219 aaKnown RBP7.08□□□□□ -1.28
CKAP2-201ENST00000258607 FOLR2P14207 255 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 SRP14P37108 136 aaKnown RBP7.08□□□□□ -1.28
CKAP2-201ENST00000258607 UBE2E1P51965 193 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 TRGV9Q99603 122 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
CKAP2-201ENST00000258607 FBN1P35555 2871 aaKnown RBP7.08□□□□□ -1.28
CKAP2-201ENST00000258607 IGHV3OR16-12A0A075B7B8 117 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 PSMB11A5LHX3 300 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 BMPR1BO00238 502 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 ZNF688P0C7X2 276 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 ATP5G2Q06055 141 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 ACTL10Q5JWF8 245 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 FAM71F2Q6NXP2 309 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 LY6G5BQ8NDX9 201 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 GTSF1Q8WW33 167 aa7.08□□□□□ -1.28
CKAP2-201ENST00000258607 PDZD2O15018 2839 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 TRAV26-2A0A0B4J265 109 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 M0R1W7 72 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 IGHV1-69P01742 117 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 GATA1P15976 413 aaPredicted RBP7.07□□□□□ -1.28
CKAP2-201ENST00000258607 SMR3AQ99954 134 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 MUC4Q99102 2169 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 K7EQM0 130 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 GOSR1O95249 250 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 CRYGBP07316 175 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 TMEM183BQ1AE95 376 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 NCOR1P1Q9H4R4 102 aa7.07□□□□□ -1.28
CKAP2-201ENST00000258607 AARDQ4LEZ3 155 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 Q5PR19 223 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 ZNF843Q8N446 348 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 WFDC11Q8NEX6 87 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 BORCS7Q96B45 105 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 TENM1Q9UKZ4 2725 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 TRBV19A0A075B6N1 114 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 TRAV12-2A0A075B6T6 113 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 A0A1B0GV90 55 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 EGR2P11161 476 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-201ENST00000258607 S100A4P26447 101 aaKnown RBP7.06□□□□□ -1.28
CKAP2-201ENST00000258607 TMEM30BQ3MIR4 351 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 C18orf65Q6ZTR6 163 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 ZNF664Q8N3J9 261 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 TCEAL7Q9BRU2 100 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
CKAP2-201ENST00000258607 PPP1R14DQ9NXH3 145 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 IGLV11-55A0A075B6I3 123 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
CKAP2-201ENST00000258607 SYNJ2BPP57105 145 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 FOXE3Q13461 319 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 CYB5R2Q6BCY4 276 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 Q6ZVH6 145 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 Q6ZWC4 215 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 Q86TA4 180 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 CCDC140Q96MF4 163 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 SHANK2-AS3Q9BTD1 123 aa7.06□□□□□ -1.28
CKAP2-201ENST00000258607 DIRC3C9JPN6 131 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 GAS8-AS1O95177 125 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 FAM74A4Q5TZK3 123 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 LYZL1Q6UWQ5 148 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 OR4X2Q8NGF9 303 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 PRSS3P2Q8NHM4 247 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 C10orf105Q8TEF2 133 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 TMEM189A5PLL7 270 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 ODF3BA8MYP8 253 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 FAM106AQ4KMX7 169 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 THAP8Q8NA92 274 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 METTL26Q96S19 204 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 A8MWL6 223 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 HOXA3O43365 443 aaPredicted RBP7.05□□□□□ -1.28
CKAP2-201ENST00000258607 RPLP1P05386 114 aaKnown RBP7.05□□□□□ -1.28
CKAP2-201ENST00000258607 PAX8Q06710 450 aa7.05□□□□□ -1.28
CKAP2-201ENST00000258607 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
CKAP2-201ENST00000258607 ZNF124Q15973 351 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms