RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CRYGAP11844 174 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 Q6ZQT7 251 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 FRMPD3Q5JV73 1810 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 SCN5AQ14524 2016 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 TEX49A0A1B0GTD5 131 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 C4orf51C9J302 202 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 CDAP32320 146 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 CD164L2Q6UWJ8 174 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 ZNHIT1O43257 154 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 FHL5Q5TD97 284 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 LINC01587Q99440 93 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 ZMAT4Q9H898 229 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 IGHMP01871 453 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 ZNF492Q9P255 531 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 F8VRH5 84 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 CCL4P13236 92 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 IGHV3-15A0A0B4J1V0 119 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 K7EMI3 77 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 LTAP01374 205 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 CYYR1Q96J86 154 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 BAALC-AS2P0C853 105 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 ZNF883P0CG24 379 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 Q8N976 141 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 SLC50A1Q9BRV3 221 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 ARTNQ5T4W7 220 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 IGKV1D-16P01601 117 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 EXOC3-AS1Q8N2X6 119 aa5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 MRPL53Q96EL3 112 aaKnown RBP5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 FNDC1Q4ZHG4 1894 aaPredicted RBP5.41□□□□□ -1.54
PDGFRA-201ENST00000257290 TRGV5A0A0B4J1U4 118 aa5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 TEX22C9J3V5 150 aa5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 UBE2AP49459 152 aa5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 CRYGDP07320 174 aa5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 HAMPP81172 84 aa5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 NFAM1Q8NET5 270 aaPredicted RBP5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 ZNF625Q96I27 306 aaPredicted RBP5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 C19orf54Q5BKX5 351 aa5.4□□□□□ -1.54
PDGFRA-201ENST00000257290 RASL10AQ92737 203 aa5.4□□□□□ -1.55
PDGFRA-201ENST00000257290 COL4A6Q14031 1691 aa5.4□□□□□ -1.55
PDGFRA-201ENST00000257290 DEFB108AA8MXU0 73 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 CRPP02741 224 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 TREML4Q6UXN2 200 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 SHANK2-AS3Q9BTD1 123 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 Q9H3A6 140 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 RHOHQ15669 191 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 NDUFA11Q86Y39 141 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 DOCK9Q9BZ29 2069 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 IGLV1-36A0A0B4J1U3 117 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 ZIC3O60481 467 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 MRPS12O15235 138 aaKnown RBP5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 IGHV3-9P01782 118 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 AJUBAQ96IF1 538 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 RNF114Q9Y508 228 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 SS18L1O75177 396 aaPredicted RBP5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 CSRP1P21291 193 aaKnown RBP5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 STPG1Q5TH74 334 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 ZFP2Q6ZN57 461 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 TMEM74BQ9NUR3 256 aa5.39□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV1D-33P01593 117 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV1-33P01594 117 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 DAZ2Q13117 558 aaKnown RBP5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 C16orf47Q6ZP98 133 aaPredicted RBP5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 ZNF826PQ6ZT77 177 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 DAZ4Q86SG3 579 aaKnown RBP5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 Q8N8P6 123 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 DAZ1Q9NQZ3 744 aaKnown RBP5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 DAZ3Q9NR90 486 aaKnown RBP5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 PHLDA3Q9Y5J5 127 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 LHFPL6Q9Y693 200 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 DOCK11Q5JSL3 2073 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 HS3ST6Q96QI5 342 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 PRSS22Q9GZN4 317 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 ANAPC10Q9UM13 185 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 ICOSQ9Y6W8 199 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 IGKV1D-8A0A087WSZ0 117 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 A0A0A6YYD4 124 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 IGHV3-43A0A0B4J1X8 118 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 TRBV12-3P01733 135 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 IGHV3-43DP0DP04 118 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 LYZL1Q6UWQ5 148 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 DYNAPQ8N1N2 210 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 RFESDQ8TAC1 157 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 MYO9BQ13459 2157 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 NLRC5Q86WI3 1866 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 TRAV3A0A0B4J244 114 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 TRBV7-7A0A0K0K1E9 115 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 GFRA3O60609 400 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 FLVCR1-AS1Q8TAF5 88 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 VWA8A3KMH1 1905 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 CCL1P22362 96 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 PAX8Q06710 450 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 Q6ZT83 130 aa5.38□□□□□ -1.55
PDGFRA-201ENST00000257290 NXPH4O95158 308 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 CCL3P10147 92 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 CD24P25063 80 aa5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 CXorf67Q86X51 503 aaPredicted RBP5.37□□□□□ -1.55
PDGFRA-201ENST00000257290 TTTY13Q9BZ97 58 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms