RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 MAP1LC3CQ9BXW4 147 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 SH2D7A6NKC9 451 aaPredicted RBP17.08■□□□□ 0.33
RNF39-201ENST00000244360 IGHV4-39P01824 125 aa17.08■□□□□ 0.33
RNF39-201ENST00000244360 SERTM2A0A1B0GWG4 89 aa17.08■□□□□ 0.32
RNF39-201ENST00000244360 OR2T8A6NH00 312 aa17.08■□□□□ 0.32
RNF39-201ENST00000244360 M0QZ24 198 aa17.08■□□□□ 0.32
RNF39-201ENST00000244360 NPFFO15130 113 aa17.08■□□□□ 0.32
RNF39-201ENST00000244360 IGHV3-23P01764 117 aa17.07■□□□□ 0.32
RNF39-201ENST00000244360 PIP4P2Q8N4L2 257 aa17.07■□□□□ 0.32
RNF39-201ENST00000244360 MED13LQ71F56 2210 aa17.07■□□□□ 0.32
RNF39-201ENST00000244360 HSBP1L1C9JCN9 74 aa17.06■□□□□ 0.32
RNF39-201ENST00000244360 HINT1P49773 126 aaPredicted RBP17.06■□□□□ 0.32
RNF39-201ENST00000244360 CENPVL3A0A0U1RRI6 287 aa17.06■□□□□ 0.32
RNF39-201ENST00000244360 PKD1L2Q7Z442 2459 aa17.06■□□□□ 0.32
RNF39-201ENST00000244360 M0R3E3 92 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 RPL7P18124 248 aaKnown RBP17.05■□□□□ 0.32
RNF39-201ENST00000244360 PRR31Q5SQ13 230 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 ARL6IP6Q8N6S5 226 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 ZNF502Q8TBZ5 544 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 AAMDCQ9H7C9 122 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 ATP6V0E1O15342 81 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 CT45A10P0DMU9 189 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 UNQ5815/PRO19632Q6UWF5 114 aa17.05■□□□□ 0.32
RNF39-201ENST00000244360 PSG9Q00887 426 aa17.04■□□□□ 0.32
RNF39-201ENST00000244360 TMUB1Q9BVT8 246 aa17.04■□□□□ 0.32
RNF39-201ENST00000244360 RABAC1Q9UI14 185 aa17.04■□□□□ 0.32
RNF39-201ENST00000244360 ARMS2P0C7Q2 107 aa17.04■□□□□ 0.32
RNF39-201ENST00000244360 PAX8Q06710 450 aa17.04■□□□□ 0.32
RNF39-201ENST00000244360 ZNF738Q8NE65 137 aa17.04■□□□□ 0.32
RNF39-201ENST00000244360 GOSR1O95249 250 aa17.03■□□□□ 0.32
RNF39-201ENST00000244360 MS4A6AQ9H2W1 248 aa17.03■□□□□ 0.32
RNF39-201ENST00000244360 COX11Q9Y6N1 276 aa17.03■□□□□ 0.32
RNF39-201ENST00000244360 CACNA1AO00555 2505 aa17.03■□□□□ 0.32
RNF39-201ENST00000244360 ECSCRQ19T08 205 aa17.02■□□□□ 0.32
RNF39-201ENST00000244360 C15orf32Q32M92 178 aa17.02■□□□□ 0.32
RNF39-201ENST00000244360 LINC00173Q6ZV60 143 aa17.02■□□□□ 0.32
RNF39-201ENST00000244360 FBLL1A6NHQ2 334 aaKnown RBP17.02■□□□□ 0.32
RNF39-201ENST00000244360 CSN1S1P47710 185 aa17.02■□□□□ 0.32
RNF39-201ENST00000244360 ZNF493Q6ZR52 646 aa17.02■□□□□ 0.32
RNF39-201ENST00000244360 AP5S1Q9NUS5 200 aa17.02■□□□□ 0.32
RNF39-201ENST00000244360 S100A7P31151 101 aa17.01■□□□□ 0.31
RNF39-201ENST00000244360 CRIP1P50238 77 aa17.01■□□□□ 0.31
RNF39-201ENST00000244360 RHOGP84095 191 aa17.01■□□□□ 0.31
RNF39-201ENST00000244360 COX8CQ7Z4L0 72 aa17.01■□□□□ 0.31
RNF39-201ENST00000244360 C5orf56Q8N8D9 126 aa17.01■□□□□ 0.31
RNF39-201ENST00000244360 SMAD5-AS1Q9Y6J3 95 aa17.01■□□□□ 0.31
RNF39-201ENST00000244360 SLC25A34Q6PIV7 304 aa17■□□□□ 0.31
RNF39-201ENST00000244360 ASH1LQ9NR48 2969 aaKnown RBP17■□□□□ 0.31
RNF39-201ENST00000244360 GPR183P32249 361 aa17■□□□□ 0.31
RNF39-201ENST00000244360 ZFAND3Q9H8U3 227 aa17■□□□□ 0.31
RNF39-201ENST00000244360 AKAP6Q13023 2319 aa16.99■□□□□ 0.31
RNF39-201ENST00000244360 PIEZO1Q92508 2521 aa16.99■□□□□ 0.31
RNF39-201ENST00000244360 TCF21O43680 179 aa16.99■□□□□ 0.31
RNF39-201ENST00000244360 LINC01545Q5VT33 79 aa16.99■□□□□ 0.31
RNF39-201ENST00000244360 FA2HQ7L5A8 372 aa16.99■□□□□ 0.31
RNF39-201ENST00000244360 OR10AG1Q8NH19 301 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 ASCL2Q99929 193 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 PIMREGQ9BSJ6 248 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 hDV102S1A0JD36 115 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 TMEM8BA6NDV4 472 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 CSN3P07498 182 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 ZNF138P52744 262 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 CCDC140Q96MF4 163 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 SCRT2Q9NQ03 307 aa16.98■□□□□ 0.31
RNF39-201ENST00000244360 ABCA2Q9BZC7 2435 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 LINC01548A6NM66 108 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 G3V318 75 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 PTTG1IPP53801 180 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 SAPCD1Q5SSQ6 148 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 PRSS3P2Q8NHM4 247 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 C8orf49Q96NF6 230 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 IGHV1-69DA0A0B4J2H0 117 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 IGHV4-61A0A0C4DH41 118 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 TMEM189A5PLL7 270 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 IGHV1-69P01742 117 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 C10orf105Q8TEF2 133 aa16.97■□□□□ 0.31
RNF39-201ENST00000244360 IGHG4P01861 327 aa16.96■□□□□ 0.31
RNF39-201ENST00000244360 CLEC3BP05452 202 aa16.96■□□□□ 0.31
RNF39-201ENST00000244360 PRB4P10163 310 aaPredicted RBP16.96■□□□□ 0.31
RNF39-201ENST00000244360 RAB9AP51151 201 aa16.96■□□□□ 0.31
RNF39-201ENST00000244360 UBE2V1Q13404 147 aa16.96■□□□□ 0.31
RNF39-201ENST00000244360 CCL19Q99731 98 aa16.96■□□□□ 0.31
RNF39-201ENST00000244360 MOB4Q9Y3A3 225 aa16.96■□□□□ 0.31
RNF39-201ENST00000244360 A0A087X0K7 114 aa16.96■□□□□ 0.3
RNF39-201ENST00000244360 C19orf54Q5BKX5 351 aa16.96■□□□□ 0.3
RNF39-201ENST00000244360 C12orf54Q6X4T0 127 aa16.96■□□□□ 0.3
RNF39-201ENST00000244360 NDUFS8O00217 210 aa16.95■□□□□ 0.3
RNF39-201ENST00000244360 CRIP2P52943 208 aaPredicted RBP16.95■□□□□ 0.3
RNF39-201ENST00000244360 RPS20P60866 119 aaKnown RBP16.95■□□□□ 0.3
RNF39-201ENST00000244360 PIFOQ8TCI5 191 aa16.95■□□□□ 0.3
RNF39-201ENST00000244360 PMCHL2Q9BQD1 86 aa16.95■□□□□ 0.3
RNF39-201ENST00000244360 ZNF747Q9BV97 191 aa16.95■□□□□ 0.3
RNF39-201ENST00000244360 CBY1Q9Y3M2 126 aa16.95■□□□□ 0.3
RNF39-201ENST00000244360 U3KQK5 164 aa16.95■□□□□ 0.3
RNF39-201ENST00000244360 IGKV2-40A0A087WW87 121 aaPredicted RBP16.94■□□□□ 0.3
RNF39-201ENST00000244360 IGKV2D-40P01614 121 aaPredicted RBP16.94■□□□□ 0.3
RNF39-201ENST00000244360 EEF1AKMT3Q96AZ1 226 aa16.94■□□□□ 0.3
RNF39-201ENST00000244360 TPPP3Q9BW30 176 aa16.94■□□□□ 0.3
RNF39-201ENST00000244360 CLPSL1A2RUU4 121 aa16.94■□□□□ 0.3
RNF39-201ENST00000244360 BUB3O43684 328 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms