RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 IGKV2D-40P01614 121 aaPredicted RBP9.73□□□□□ -0.85
NUP88-201ENST00000225696 RPS20P60866 119 aaKnown RBP9.73□□□□□ -0.85
NUP88-201ENST00000225696 MRPL51Q4U2R6 128 aaKnown RBP9.73□□□□□ -0.85
NUP88-201ENST00000225696 FAM104BQ5XKR9 115 aa9.73□□□□□ -0.85
NUP88-201ENST00000225696 ASCL5Q7RTU5 278 aa9.73□□□□□ -0.85
NUP88-201ENST00000225696 DYNLRB1Q9NP97 96 aa9.73□□□□□ -0.85
NUP88-201ENST00000225696 TLN1Q9Y490 2541 aaKnown RBP9.72□□□□□ -0.85
NUP88-201ENST00000225696 HRNRQ86YZ3 2850 aaPredicted RBP9.72□□□□□ -0.85
NUP88-201ENST00000225696 SHISA9B4DS77 424 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 H3BUT2 72 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 SH2D1AO60880 128 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
NUP88-201ENST00000225696 UFSP1Q6NVU6 142 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 BOD1L2Q8IYS8 172 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 Q8TAT8 98 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 DKK2Q9UBU2 259 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 U3KQK5 164 aa9.72□□□□□ -0.85
NUP88-201ENST00000225696 GAGE10A6NGK3 116 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 TIMM23O14925 209 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 NPYP01303 97 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 ARL6IP6Q8N6S5 226 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 RPEQ96AT9 228 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 RAB37Q96AX2 223 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 TTTY13Q9BZ97 58 aa9.71□□□□□ -0.85
NUP88-201ENST00000225696 RALYQ9UKM9 306 aaKnown RBP9.71□□□□□ -0.85
NUP88-201ENST00000225696 CEP295Q9C0D2 2601 aa9.71□□□□□ -0.86
NUP88-201ENST00000225696 IGHV3OR16-8A0A075B7F1 116 aa9.71□□□□□ -0.86
NUP88-201ENST00000225696 IGHV3-23P01764 117 aa9.71□□□□□ -0.86
NUP88-201ENST00000225696 EGR2P11161 476 aaPredicted RBP9.71□□□□□ -0.86
NUP88-201ENST00000225696 HLA-DMBP28068 263 aa9.71□□□□□ -0.86
NUP88-201ENST00000225696 TM4SF20Q53R12 229 aa9.71□□□□□ -0.86
NUP88-201ENST00000225696 ADAMTSL5Q6ZMM2 481 aa9.71□□□□□ -0.86
NUP88-201ENST00000225696 TMEM189A5PLL7 270 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 RIPPLY3P57055 190 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 SEC11AP67812 179 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 ORMDL3Q8N138 153 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 C18orf15Q96N68 181 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 NBASA2RRP1 2371 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
NUP88-201ENST00000225696 LY6LH3BQJ8 138 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 K7EQM0 130 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 GFRALQ6UXV0 394 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 VGLL1Q99990 258 aa9.7□□□□□ -0.86
NUP88-201ENST00000225696 PPIAL4CA0A0B4J2A2 164 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 A0A1B0GW15 77 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 C9orf118A6NHY6 69 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
NUP88-201ENST00000225696 CT45A10P0DMU9 189 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 PPIAL4GP0DN37 164 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 NMUP48645 174 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 LGALS9BQ3B8N2 356 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
NUP88-201ENST00000225696 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 NDUFS7O75251 213 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 LY6HO94772 140 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 IGHG4P01861 327 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 TWIST1Q15672 202 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 LYPD1Q8N2G4 141 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 FER1L6-AS1Q8NA97 138 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 TNFRSF14Q92956 283 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 IFI27L1Q96BM0 104 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 ABHD17AQ96GS6 310 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 CSTL1Q9H114 145 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 ANKHD1Q8IWZ3 2542 aaKnown RBP9.68□□□□□ -0.86
NUP88-201ENST00000225696 IGHV3-35A0A0C4DH35 117 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 HBDP02042 147 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 CKS2P33552 79 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 Q6AWC8 147 aa9.68□□□□□ -0.86
NUP88-201ENST00000225696 CELSR1Q9NYQ6 3014 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 A0A0G2JLM5 398 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 A1L4Q6 167 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 H3BRM9 83 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 GATA1P15976 413 aaPredicted RBP9.67□□□□□ -0.86
NUP88-201ENST00000225696 PSMG3-AS1Q96PY0 264 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 PRR25Q96S07 402 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 ONECUT1Q9UBC0 465 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 K7EMI3 77 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 GNG7O60262 68 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
NUP88-201ENST00000225696 NDPQ00604 133 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 KLRD1Q13241 179 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 DPF1Q92782 380 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 JKAMPQ9P055 326 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 SMAD5-AS1Q9Y6J3 95 aa9.67□□□□□ -0.86
NUP88-201ENST00000225696 K7ERU9 68 aa9.66□□□□□ -0.86
NUP88-201ENST00000225696 PRRG2O14669 202 aa9.66□□□□□ -0.86
NUP88-201ENST00000225696 PRR30Q53SZ7 412 aaPredicted RBP9.66□□□□□ -0.86
NUP88-201ENST00000225696 OR1N2Q8NGR9 330 aa9.66□□□□□ -0.86
NUP88-201ENST00000225696 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
NUP88-201ENST00000225696 AAMDCQ9H7C9 122 aa9.66□□□□□ -0.86
NUP88-201ENST00000225696 K7EP34 96 aa9.65□□□□□ -0.86
NUP88-201ENST00000225696 EVI2AP22794 236 aa9.65□□□□□ -0.86
NUP88-201ENST00000225696 SPTA1P02549 2419 aa9.65□□□□□ -0.86
NUP88-201ENST00000225696 A6NDN8 102 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms