RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 A1L4Q6 167 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 D6R8Y8 96 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
RAB3D-201ENST00000222120 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 AMMECR1LQ6DCA0 310 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 ORMDL3Q8N138 153 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 ATP5L2Q7Z4Y8 100 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 TMEM213A2RRL7 107 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 IGKV1-17P01599 117 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 GAGE1Q13065 139 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 ERCC8Q13216 396 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
RAB3D-201ENST00000222120 SOX21Q9Y651 276 aaPredicted RBP10.78□□□□□ -0.68
RAB3D-201ENST00000222120 TRBV19A0A075B6N1 114 aa10.77□□□□□ -0.68
RAB3D-201ENST00000222120 PLP1P60201 277 aa10.77□□□□□ -0.68
RAB3D-201ENST00000222120 PSG3Q16557 428 aa10.77□□□□□ -0.68
RAB3D-201ENST00000222120 RNF182Q8N6D2 247 aa10.77□□□□□ -0.68
RAB3D-201ENST00000222120 MAP1LC3AQ9H492 121 aa10.77□□□□□ -0.68
RAB3D-201ENST00000222120 PEF1Q9UBV8 284 aaKnown RBP10.77□□□□□ -0.68
RAB3D-201ENST00000222120 HLA-DMBP28068 263 aa10.77□□□□□ -0.69
RAB3D-201ENST00000222120 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.69
RAB3D-201ENST00000222120 C7orf71A4D174 169 aa10.77□□□□□ -0.69
RAB3D-201ENST00000222120 RUSC1-AS1Q66K80 236 aa10.77□□□□□ -0.69
RAB3D-201ENST00000222120 MRPL52Q86TS9 123 aaKnown RBP10.77□□□□□ -0.69
RAB3D-201ENST00000222120 ORAOV1Q8WV07 137 aa10.77□□□□□ -0.69
RAB3D-201ENST00000222120 RNF5Q99942 180 aa10.77□□□□□ -0.69
RAB3D-201ENST00000222120 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 OR10J6PQ8NGY7 276 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 CCL19Q99731 98 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 NAA38Q9BRA0 125 aaKnown RBP10.76□□□□□ -0.69
RAB3D-201ENST00000222120 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 FABP5P3A8MUU1 101 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 IGLV1-47P01700 117 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 TET2Q6N021 2002 aaPredicted RBP10.76□□□□□ -0.69
RAB3D-201ENST00000222120 SH2D1AO60880 128 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 POLQO75417 2590 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 LOC400499M0QZD8 3231 aa10.76□□□□□ -0.69
RAB3D-201ENST00000222120 ZNF414Q96IQ9 312 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 PIMREGQ9BSJ6 248 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 WDFY3Q8IZQ1 3526 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 M0R1W7 72 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 EFNA4P52798 201 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 MAP1AP78559 2803 aaPredicted RBP10.75□□□□□ -0.69
RAB3D-201ENST00000222120 ATP6V0E1O15342 81 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 GCSHP23434 173 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 FAM120AOSQ5T036 256 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 CACNG7P62955 275 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 MYOZ3Q8TDC0 251 aa10.75□□□□□ -0.69
RAB3D-201ENST00000222120 RPS20P60866 119 aaKnown RBP10.74□□□□□ -0.69
RAB3D-201ENST00000222120 FAM231DQ6ZW35 169 aa10.74□□□□□ -0.69
RAB3D-201ENST00000222120 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
RAB3D-201ENST00000222120 K7EIM0 57 aa10.74□□□□□ -0.69
RAB3D-201ENST00000222120 IFI27P40305 119 aaPredicted RBP10.74□□□□□ -0.69
RAB3D-201ENST00000222120 RASL11AQ6T310 242 aa10.74□□□□□ -0.69
RAB3D-201ENST00000222120 A0A087X0K7 114 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 GP9P14770 177 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 MEGF9Q9H1U4 602 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 H3BUT2 72 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 IGLV2-8P01709 118 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
RAB3D-201ENST00000222120 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 TEX22C9J3V5 150 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
RAB3D-201ENST00000222120 LINC00574Q9H8X3 128 aa10.73□□□□□ -0.69
RAB3D-201ENST00000222120 ZNF292O60281 2723 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 LRRK2Q5S007 2527 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 I3L2K1 104 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 Q6AWC8 147 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 FABP2P12104 132 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 RAB9AP51151 201 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 FAM74A4Q5TZK3 123 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 SP5Q6BEB4 398 aaPredicted RBP10.72□□□□□ -0.69
RAB3D-201ENST00000222120 RNASE8Q8TDE3 154 aaKnown RBP10.72□□□□□ -0.69
RAB3D-201ENST00000222120 SMIM12Q96EX1 92 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 CCL25O15444 150 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 IGLL1P15814 213 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 LINC00173Q6ZV60 143 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 VGLL1Q99990 258 aa10.72□□□□□ -0.69
RAB3D-201ENST00000222120 NPFFO15130 113 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 ADORA2A-AS1P86434 159 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 TMEM97Q5BJF2 176 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
RAB3D-201ENST00000222120 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 TRAV8-6A0A0B4J262 113 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 H3BUX3 64 aa10.71□□□□□ -0.69
RAB3D-201ENST00000222120 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms