RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 GFRALQ6UXV0 394 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 ABHD17AQ96GS6 310 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 CT45A10P0DMU9 189 aa11□□□□□ -0.65
USH1C-201ENST00000005226 FGF6P10767 208 aa11□□□□□ -0.65
USH1C-201ENST00000005226 KLRD1Q13241 179 aa11□□□□□ -0.65
USH1C-201ENST00000005226 MRPL51Q4U2R6 128 aaKnown RBP11□□□□□ -0.65
USH1C-201ENST00000005226 SAPCD1Q5SSQ6 148 aa11□□□□□ -0.65
USH1C-201ENST00000005226 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
USH1C-201ENST00000005226 THYN1Q9P016 225 aa11□□□□□ -0.65
USH1C-201ENST00000005226 TLN1Q9Y490 2541 aaKnown RBP11□□□□□ -0.65
USH1C-201ENST00000005226 VSTM5A8MXK1 200 aa11□□□□□ -0.65
USH1C-201ENST00000005226 RAB37Q96AX2 223 aa11□□□□□ -0.65
USH1C-201ENST00000005226 C18orf15Q96N68 181 aa11□□□□□ -0.65
USH1C-201ENST00000005226 NPIPB5A8MRT5 1133 aa11□□□□□ -0.65
USH1C-201ENST00000005226 GNG7O60262 68 aa11□□□□□ -0.65
USH1C-201ENST00000005226 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
USH1C-201ENST00000005226 HES1Q14469 280 aa11□□□□□ -0.65
USH1C-201ENST00000005226 FAM104BQ5XKR9 115 aa11□□□□□ -0.65
USH1C-201ENST00000005226 SAP30O75446 220 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 NPYP01303 97 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 EGR2P11161 476 aaPredicted RBP10.99□□□□□ -0.65
USH1C-201ENST00000005226 TM4SF20Q53R12 229 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 PCP2Q8IVA1 136 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 LINC01560Q8TB33 94 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 PTPRZ1P23471 2315 aaPredicted RBP10.99□□□□□ -0.65
USH1C-201ENST00000005226 PAX2Q02962 417 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 TWIST1Q15672 202 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 JMJD8Q96S16 334 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 VGLL1Q99990 258 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 DKK2Q9UBU2 259 aa10.99□□□□□ -0.65
USH1C-201ENST00000005226 TRBV6-1A0A0K0K1D8 114 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 PPIFP30405 207 aaKnown RBP10.98□□□□□ -0.65
USH1C-201ENST00000005226 APOBEC3AP31941 199 aaPredicted RBP10.98□□□□□ -0.65
USH1C-201ENST00000005226 TNFRSF14Q92956 283 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 PEF1Q9UBV8 284 aaKnown RBP10.98□□□□□ -0.65
USH1C-201ENST00000005226 CEP295Q9C0D2 2601 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.98□□□□□ -0.65
USH1C-201ENST00000005226 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 H3BUT2 72 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 SPTA1P02549 2419 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 NMUP48645 174 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 ORMDL3Q8N138 153 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
USH1C-201ENST00000005226 WI2-2373I1.2A0A1W2PRP0 233 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 CKS2P33552 79 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 GAGE10A6NGK3 116 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 ZNF493Q6ZR52 646 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 Q8NA96 180 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 FANCD2OSQ96PS1 177 aa10.97□□□□□ -0.65
USH1C-201ENST00000005226 NBR2O15453 112 aa10.96□□□□□ -0.65
USH1C-201ENST00000005226 GRNP28799 593 aaKnown RBP10.96□□□□□ -0.65
USH1C-201ENST00000005226 COTL1Q14019 142 aa10.96□□□□□ -0.65
USH1C-201ENST00000005226 JKAMPQ9P055 326 aa10.96□□□□□ -0.65
USH1C-201ENST00000005226 F8W735 103 aaPredicted RBP10.96□□□□□ -0.66
USH1C-201ENST00000005226 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
USH1C-201ENST00000005226 EVI2AP22794 236 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 NDPQ00604 133 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 ERCC8Q13216 396 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 LYPD1Q8N2G4 141 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 U3KQK5 164 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 ANKHD1Q8IWZ3 2542 aaKnown RBP10.95□□□□□ -0.66
USH1C-201ENST00000005226 A0A1B0GW15 77 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
USH1C-201ENST00000005226 NDUFS7O75251 213 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 PRR25Q96S07 402 aa10.95□□□□□ -0.66
USH1C-201ENST00000005226 HBDP02042 147 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 ORM1P02763 201 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 A1L4Q6 167 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 SMAD7O15105 426 aaKnown RBP10.94□□□□□ -0.66
USH1C-201ENST00000005226 PPBPP02775 128 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 RIPPLY3P57055 190 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 PAX8Q06710 450 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 Q6AWC8 147 aa10.94□□□□□ -0.66
USH1C-201ENST00000005226 IGHV3-66A0A0C4DH42 116 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 K7EMI3 77 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 CD3EP07766 207 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 LGALS9BQ3B8N2 356 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 LGALS9CQ6DKI2 356 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 CFHR4Q92496 578 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 MEGF9Q9H1U4 602 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 IGHV3OR16-13A0A075B7E8 117 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 IGHV3-74A0A0B4J1X5 117 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 B9A039 149 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 IGHG4P01861 327 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 MFAP4P55083 255 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 SEC11AP67812 179 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 ZNF672Q499Z4 452 aaPredicted RBP10.93□□□□□ -0.66
USH1C-201ENST00000005226 DYNAPQ8N1N2 210 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 DPM3Q9P2X0 92 aa10.93□□□□□ -0.66
USH1C-201ENST00000005226 IGF2-ASQ6U949 168 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms