RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Scgb3a2Q920H1 91 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mrps36Q9CQX8 102 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Urb1Q571H0 2274 aaKnown RBP10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Myo15aQ9QZZ4 3511 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Trav6n-7A0A075B6A6 116 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Scgb1b10A0A087WPW0 93 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Fndc10A2A9Q0 223 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mettl23A2AA28 253 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Samt3A2ARK7 233 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm14443A2ARX0 610 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr221B2RVX8 311 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 StomP54116 284 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ube2g2P60605 165 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gnb1P62874 340 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Fam173aQ501J2 229 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Taar9Q5QD04 348 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Npy6rQ61212 371 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Fam78bQ8BQN5 261 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1009Q8VFK1 314 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Spaca3Q9D9X8 221 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Trem3Q9JKE1 183 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mpdu1Q9R0Q9 247 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Tusc2Q9WVF8 110 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Cacna1gQ5SUF7 2381 aa10.76□□□□□ -0.69
Nup88-203ENSMUST00000108531 Iglv3A0A0B4J1K5 122 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm35060A0A140LIV7 231 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm4884E9PVP9 694 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Zfp867E9Q2M4 473 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 CckarO08786 436 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Pax8Q00288 457 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Zfp386Q1WWJ5 626 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Trp53rkaQ5U452 244 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Adora3Q61618 319 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1474Q7TQQ8 314 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr335-psQ7TRY6 312 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Foxn4Q8K3Q3 521 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr968Q8VFN4 314 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1445Q8VFW9 314 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr641Q8VGX6 312 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mrpl3Q99N95 348 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Tp53rkQ99PW4 244 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Fscn3Q9QXW4 498 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr912A0A1L1SSS5 310 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm12830F6XVH0 157 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm20825J3QM67 227 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ssty2Q149W4 227 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm21394Q497R7 227 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm20854Q62461 227 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Spred3Q6P6N5 408 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Pef1Q8BFY6 275 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gng12Q9DAS9 72 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Try5Q9QUK9 246 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Try4Q9R0T7 246 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Egr4Q9WUF2 478 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Timm8a1Q9WVA2 97 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Pde4dipQ80YT7 2224 aa10.75□□□□□ -0.69
Nup88-203ENSMUST00000108531 Trav5-4A0A075B652 114 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm2381G3UY53 305 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ifitm7G3X9Z2 141 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mef2bO55087 349 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ssty1P13675 232 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gpr12P35412 334 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Srsf6Q3TWW8 339 aaKnown RBP10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 SspnQ62147 216 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 RalyQ64012 312 aaKnown RBP10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Tox3Q80W03 575 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 AdtrpQ8C138 230 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ythdf2Q91YT7 579 aaKnown RBP10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Glrx2Q923X4 156 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Arl13aQ9D416 372 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Abhd5Q9DBL9 351 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Vmn1r47Q9EQ51 310 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Dctn5Q9QZB9 182 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 VcanQ62059 3357 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1104A2AVB5 310 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm12169F2Z474 250 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm5129F6YHA9 99 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm20767O70517 169 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ren1P06281 402 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Klk1b22P15948 259 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Smim6Q3U0I6 56 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Zfp936Q3ULA8 456 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Znf664Q4VA44 261 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr875Q7TRE5 310 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Cdc42ep2Q8JZX9 214 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Slurp1Q9Z0K7 110 aa10.74□□□□□ -0.69
Nup88-203ENSMUST00000108531 Myo7bQ99MZ6 2113 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Kiaa1549Q68FD9 1940 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Ighv9-2A0A0B4J1J4 117 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Lnp1A0A1B0GSK3 178 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1328B1ARV2 313 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Frrs1lB1AXV0 293 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm20422E9PUR3 255 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm21244J3QK38 227 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mtco2P00405 227 aaKnown RBP10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Rom1P32958 351 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Neurog3P70661 214 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Cnn1Q08091 297 aaKnown RBP10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Rnase11Q5GAM9 192 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Smim7Q5RKS2 75 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 79.1 ms