RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 P01799 113 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Hoxa5P09021 270 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Klk1b22P15948 259 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Tppp2Q0P5Y3 170 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm21440Q3TTD8 232 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr153Q7TR48 307 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr154Q9QY00 318 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Atoh7Q9Z2E5 149 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Usf3B2RUQ2 2221 aa10.49□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Akap9Q70FJ1 3797 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Ifitm7G3X9Z2 141 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm20825J3QM67 227 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 SncaO55042 140 aaKnown RBP10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 C5ar1P30993 351 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 ClcP97400 68 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Zfp970Q08BU3 522 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 StumQ0VBF8 141 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Ssty2Q149W4 227 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm21394Q497R7 227 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 AdipoqQ60994 247 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm20854Q62461 227 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Vkorc1l1Q6TEK5 176 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Stard4Q99JV5 224 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Asxl3Q8C4A5 2259 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Zfp972A2AW65 139 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Zfp971A2BFG8 470 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm14288E9Q9W0 88 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Vmn1r113G3UWI8 307 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm20532G3UXR8 106 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 CckarO08786 436 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 TymsP07607 307 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Wnt10aP70701 417 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Tgfbr1Q64729 503 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Morn2Q6UL01 79 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr1356Q7TQU8 320 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Zfp459Q8BZ17 267 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 DscamQ9ERC8 2013 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Dmxl2Q8BPN8 3032 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Rdh16O54909 317 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Hist1h2bmP10854 126 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Ctdsp1P58466 261 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 MidnQ3TPJ7 465 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gfod1Q3UHD2 390 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Hist1h2bhQ64478 126 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Hist2h2bbQ64525 126 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Hist1h2bcQ6ZWY9 126 aaKnown RBP10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Mrpl3Q99N95 348 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Ms4a4bQ9ES61 226 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Tnfrsf13bQ9ET35 249 aa10.48□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Med12lQ8BQM9 2157 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr282A1L1B4 308 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm8677K9J7G9 307 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Pate4Q09098 99 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Rtl4Q3URY0 304 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Trav6-2Q5R1I4 113 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 SlaQ60898 281 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 NracQ8BNX7 165 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Tmem212Q8C6V3 187 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Trib1Q8K4K4 372 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Wipi1Q8R3E3 446 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Dkk4Q8VEJ3 221 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr1184Q8VG86 311 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Dok5Q91ZM9 306 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Ccdc198Q9CPZ1 294 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Q9CQ90 155 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Rer1Q9CQU3 196 aaKnown RBP10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Tusc2Q9WVF8 110 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Crybb1Q9WVJ5 250 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm28372A0A087WNV0 220 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Frrs1lB1AXV0 293 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm21882J3QN86 361 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Reg2Q08731 173 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm10447Q3UQ92 135 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr141Q60880 325 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Sfxn4Q925N1 313 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Lurap1Q9D6I9 239 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Scp2d1Q9DAH1 156 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Prss30Q9QYZ9 310 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Mpdu1Q9R0Q9 247 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Rnf7Q9WTZ1 113 aa10.47□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Scgb1b12A0A087WP21 93 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm14412A2ARR7 526 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 4930444P10RikD3YUR1 185 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr196E9PYP4 309 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Dvl1P51141 695 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Rab7aP51150 207 aaKnown RBP10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Rpl23P62830 140 aaKnown RBP10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Q0VG62 139 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Gm10645Q3UPY1 145 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Prodh2Q8VCZ9 456 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Olfr1155Q8VFR3 314 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Pbp2Q8VIN1 187 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 VsirQ9D659 308 aa10.46□□□□□ -0.73
Rnf4-201ENSMUST00000030992 Ctxnd2A0A1B0GQX3 59 aa10.46□□□□□ -0.74
Rnf4-201ENSMUST00000030992 Olfr1337A2ACY8 315 aa10.46□□□□□ -0.74
Rnf4-201ENSMUST00000030992 Samt1A2BED8 237 aa10.46□□□□□ -0.74
Rnf4-201ENSMUST00000030992 Gm15140A2BEE3 237 aa10.46□□□□□ -0.74
Rnf4-201ENSMUST00000030992 E430018J23RikE9PZQ8 461 aa10.46□□□□□ -0.74
Rnf4-201ENSMUST00000030992 Gm8653K9J7G2 307 aa10.46□□□□□ -0.74
Rnf4-201ENSMUST00000030992 Vmn1r117L7N2C9 307 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms