RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 DEFB136Q30KP8 78 aa13.42□□□□□ -0.26
PHGDH-232ENST00000641947 CENPWQ5EE01 88 aa13.42□□□□□ -0.26
PHGDH-232ENST00000641947 C5orf17Q8NAS9 161 aa13.42□□□□□ -0.26
PHGDH-232ENST00000641947 LINC01006Q8NI28 216 aa13.42□□□□□ -0.26
PHGDH-232ENST00000641947 OCC1Q8TAD7 63 aa13.42□□□□□ -0.26
PHGDH-232ENST00000641947 C16orf95Q9H693 158 aa13.42□□□□□ -0.26
PHGDH-232ENST00000641947 HELTA6NFD8 242 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 C9JCJ5 164 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 K7EN84 100 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 CRYBA1P05813 215 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 PDE6HQ13956 83 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 C1orf194Q5T5A4 169 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 C16orf54Q6UWD8 224 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 GPHB5Q86YW7 130 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
PHGDH-232ENST00000641947 A0A087X0K7 114 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 M0R3E3 92 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 ISLRO14498 428 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 IGLV2-8P01709 118 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 TCRAP04437 139 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 HLA-DMBP28068 263 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 RNF212Q495C1 297 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 IGFL4Q6B9Z1 124 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 HIST1H2BAQ96A08 127 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 SGK494Q96LW2 274 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 TCEAL7Q9BRU2 100 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 RNF24Q9Y225 148 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 NIPBLQ6KC79 2804 aaeCLIP13.4□□□□□ -0.26
PHGDH-232ENST00000641947 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-232ENST00000641947 S100A7P31151 101 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 ISOC2Q96AB3 205 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 ATG101Q9BSB4 218 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 SELENOKQ9Y6D0 94 aa13.4□□□□□ -0.26
PHGDH-232ENST00000641947 A0A087WWC5 75 aa13.39□□□□□ -0.27
PHGDH-232ENST00000641947 B4DEV8 164 aa13.39□□□□□ -0.27
PHGDH-232ENST00000641947 CDX1P47902 265 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-232ENST00000641947 RPEL1Q2QD12 228 aa13.39□□□□□ -0.27
PHGDH-232ENST00000641947 LYPD1Q8N2G4 141 aa13.39□□□□□ -0.27
PHGDH-232ENST00000641947 IGHV7-4-1A0A0J9YVY3 117 aa13.38□□□□□ -0.27
PHGDH-232ENST00000641947 TSPAN4O14817 238 aa13.38□□□□□ -0.27
PHGDH-232ENST00000641947 GNG4P50150 75 aa13.38□□□□□ -0.27
PHGDH-232ENST00000641947 C11orf44Q8N8P7 122 aa13.38□□□□□ -0.27
PHGDH-232ENST00000641947 GPR82Q96P67 336 aa13.38□□□□□ -0.27
PHGDH-232ENST00000641947 DAZ1Q9NQZ3 744 aaKnown RBP13.38□□□□□ -0.27
PHGDH-232ENST00000641947 KLF12Q9Y4X4 402 aa13.38□□□□□ -0.27
PHGDH-232ENST00000641947 TRAV8-1A0A0A6YYK1 113 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 TMEM213A2RRL7 107 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 CD28P10747 220 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 HOXD3P31249 432 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-232ENST00000641947 GALR1P47211 349 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 CNN1P51911 297 aaKnown RBP13.37□□□□□ -0.27
PHGDH-232ENST00000641947 FAM106AQ4KMX7 169 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 GOLT1AQ6ZVE7 132 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 NHLRC2Q8NBF2 726 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 ZNF331Q9NQX6 463 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-232ENST00000641947 SMCO4Q9NRQ5 59 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 ZNF785A8K8V0 405 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 IGLV2-11P01706 119 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 SYNJ2BPP57105 145 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 OR5I1Q13606 314 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 TMEM183BQ1AE95 376 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 KHDC1LQ5JSQ8 128 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 C4orf3Q8WVX3 66 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
PHGDH-232ENST00000641947 TRAV8-2A0A0B4J237 113 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 K7EMT4 169 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 CHEK1O14757 476 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 ZNF253O75346 499 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 CRLF1O75462 422 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 NDUFA7O95182 113 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 SLURP1P55000 103 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 TAS2R60P59551 318 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 PSG9Q00887 426 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 CMTM2Q8TAZ6 248 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 RHPN1-AS1Q9BWJ2 59 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
PHGDH-232ENST00000641947 DIRC3C9JPN6 131 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 C8orf86Q6ZUL3 223 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 REC114Q7Z4M0 266 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 RNF182Q8N6D2 247 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 SMPXQ9UHP9 88 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 COLCA2A8K830 154 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 ZNF705FA8MVS1 300 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-232ENST00000641947 A8MWP6 167 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 ASCL2Q99929 193 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 AAMDCQ9H7C9 122 aa13.35□□□□□ -0.27
PHGDH-232ENST00000641947 HAX1O00165 279 aa13.34□□□□□ -0.27
PHGDH-232ENST00000641947 TCF21O43680 179 aa13.34□□□□□ -0.27
PHGDH-232ENST00000641947 KLF5Q13887 457 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-232ENST00000641947 Q86TA4 180 aa13.34□□□□□ -0.27
PHGDH-232ENST00000641947 OR11H1Q8NG94 326 aa13.34□□□□□ -0.27
PHGDH-232ENST00000641947 TUBA4BQ9H853 241 aa13.34□□□□□ -0.27
PHGDH-232ENST00000641947 UFC1Q9Y3C8 167 aa13.34□□□□□ -0.27
PHGDH-232ENST00000641947 LGALS9O00182 355 aa13.33□□□□□ -0.28
PHGDH-232ENST00000641947 UBE2G1P62253 170 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms