RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TMEM252Q8N6L7 170 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 C10orf105Q8TEF2 133 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 IL36BQ9NZH7 164 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 NGFP01138 241 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 CST6Q15828 149 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 SERP2Q8N6R1 65 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 FBXL14Q8N1E6 418 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 NUP37Q8NFH4 326 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 PIFOQ8TCI5 191 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 IL36RNQ9UBH0 155 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 ANAPC10Q9UM13 185 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 H3BMM0 161 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 ZNF134P52741 427 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 CSRP2Q16527 193 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 Q6ZQT7 251 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 ZPLD1Q8TCW7 415 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 UBE2WQ96B02 151 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 GCHFRP30047 84 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 RPS11P62280 158 aaKnown RBP eCLIP3.47□□□□□ -1.85
SCN3A-209ENST00000639244 ZAR1Q86SH2 424 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 NRXN3Q9Y4C0 1643 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 FAM78AQ5JUQ0 283 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 Q8NA96 180 aa3.47□□□□□ -1.85
SCN3A-209ENST00000639244 CTXND1A0A1B0GTU2 59 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 K7ERJ3 54 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 NDUFS5O43920 106 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 PLGLAQ15195 96 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 C2orf48Q96LS8 159 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 CHAC1Q9BUX1 264 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 SLC25A2Q9BXI2 301 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 PLA2G2FQ9BZM2 168 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 RNF7Q9UBF6 113 aa3.46□□□□□ -1.85
SCN3A-209ENST00000639244 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
SCN3A-209ENST00000639244 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 LY6LH3BQJ8 138 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 SYNJ2BPP57105 145 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 SNRPD3P62318 126 aaKnown RBP3.46□□□□□ -1.86
SCN3A-209ENST00000639244 SRSF9Q13242 221 aaKnown RBP eCLIP3.46□□□□□ -1.86
SCN3A-209ENST00000639244 NFE4Q86UQ8 179 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 SLC22A24Q8N4F4 322 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 LINC00311Q8N616 119 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF414Q96IQ9 312 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 PRO0461Q9UI25 63 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 ELANEP08246 267 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 GLI4P10075 376 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM155Q4W5P6 130 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 FAM104BQ5XKR9 115 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 DCTN5Q9BTE1 182 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 LINC00597Q9H2U6 94 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 MYOZ3Q8TDC0 251 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 CARD19Q96LW7 228 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 IGF2BP2-AS1Q96M15 143 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 ROS1P08922 2347 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 IGHV3OR15-7A0A075B7D8 119 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 TRAV17A0A0B4J275 112 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 SRSF10O75494 262 aaKnown RBP3.46□□□□□ -1.86
SCN3A-209ENST00000639244 LINC00310P59036 64 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF793Q6ZN11 406 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 RPS18P62269 152 aaKnown RBP3.46□□□□□ -1.86
SCN3A-209ENST00000639244 CCL20P78556 96 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 OR5AS1Q8N127 324 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 SPTSSAQ969W0 71 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 CXCL16Q9H2A7 254 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 C2orf70A6NJV1 201 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 OR52N5Q8NH56 324 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 FAM60AQ9NP50 221 aa3.46□□□□□ -1.86
SCN3A-209ENST00000639244 TMSB15BA0A087X1C1 80 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 HOXA3O43365 443 aaPredicted RBP3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TIMM17BO60830 172 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 UBE2E1P51965 193 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 SRXN1Q9BYN0 137 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 PGLYRP1O75594 196 aaPredicted RBP3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TNFRSF12AQ9NP84 129 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 HIVEP3Q5T1R4 2406 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TCL1BO95988 128 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TRNP1Q6NT89 227 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 CSPG4Q6UVK1 2322 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 FHL3Q13643 280 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 DEFB133Q30KQ1 61 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 SLC25A20O43772 301 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 WDR86Q86TI4 376 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TIMM17AQ99595 171 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 MYMXA0A1B0GTQ4 84 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 C11orf68Q9H3H3 251 aaKnown RBP3.45□□□□□ -1.86
SCN3A-209ENST00000639244 KCPQ6ZWJ8 1503 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 IGHV1-58A0A0C4DH39 117 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TCRBV4S1A1TA0A5B7 111 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 FOXQ1Q9C009 403 aa3.45□□□□□ -1.86
SCN3A-209ENST00000639244 TRGV5A0A0B4J1U4 118 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 J3QT63 122 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 SCRG1O75711 98 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 CCL5P13501 91 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF117Q03924 483 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 KLK5Q9Y337 293 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 MOB4Q9Y3A3 225 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 LHFPL1Q86WI0 220 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms