RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 DEFB125Q8N687 156 aa-3.16□□□□□ -2.92
LMBR1-222ENST00000638959 RNASEH2CQ8TDP1 164 aaKnown RBP-3.16□□□□□ -2.92
LMBR1-222ENST00000638959 C19orf60Q96EN9 201 aa-3.16□□□□□ -2.92
LMBR1-222ENST00000638959 DHRS9Q9BPW9 319 aa-3.16□□□□□ -2.92
LMBR1-222ENST00000638959 CYSLTR1Q9Y271 337 aa-3.16□□□□□ -2.92
LMBR1-222ENST00000638959 ATAD2BQ9ULI0 1458 aa-3.16□□□□□ -2.92
LMBR1-222ENST00000638959 C10orf71Q711Q0 1435 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 DUXBA0A1W2PPF3 345 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 PTMAP06454 111 aaKnown RBP-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 RAB5CP51148 216 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 NEDD8Q15843 81 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 C1orf140Q5VVS0 124 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 LRRC18Q8N456 261 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 ATP6V1C2Q8NEY4 427 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 HYLS1Q96M11 299 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 SPANXB1Q9NS25 103 aaPredicted RBP-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 BICRAQ9NZM4 1560 aa-3.17□□□□□ -2.92
LMBR1-222ENST00000638959 PKD1P98161 4303 aa-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 VIRMAQ69YN4 1812 aaKnown RBP-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 EXOC1LA0A1B0GW35 172 aa-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 ATP6V1G2O95670 118 aa-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 CSAG1Q6PB30 78 aa-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 SPG11Q96JI7 2443 aa-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 PLXNA1Q9UIW2 1896 aa-3.18□□□□□ -2.92
LMBR1-222ENST00000638959 MYO5AQ9Y4I1 1855 aaKnown RBP-3.19□□□□□ -2.92
LMBR1-222ENST00000638959 TRAV17A0A0B4J275 112 aa-3.19□□□□□ -2.92
LMBR1-222ENST00000638959 SNX4O95219 450 aa-3.19□□□□□ -2.92
LMBR1-222ENST00000638959 OTCP00480 354 aa-3.19□□□□□ -2.92
LMBR1-222ENST00000638959 NOSIPQ9Y314 301 aaKnown RBP-3.19□□□□□ -2.92
LMBR1-222ENST00000638959 TRGV10A0A0A0MS01 117 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 NDUFB3O43676 98 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 HLA-DRAP01903 254 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 GALP22466 123 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 H3F3AP84243 136 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 HACD4Q5VWC8 232 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 COMMD7Q86VX2 200 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 FAM9BQ8IZU0 186 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 TMEM161BQ8NDZ6 487 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 AP1S3Q96PC3 154 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 MRPL36Q9P0J6 103 aaKnown RBP-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 FBXO5Q9UKT4 447 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 LAMA3Q16787 3333 aa-3.2□□□□□ -2.92
LMBR1-222ENST00000638959 DOCK11Q5JSL3 2073 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 OR4C46A6NHA9 309 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 H0Y980 276 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 SERPINE1P05121 402 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 SLC35E2BP0CK96 405 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 CDC34P49427 236 aaPredicted RBP-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 RSU1Q15404 277 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 TMCO2Q7Z6W1 182 aaPredicted RBP-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 OR5D16Q8NGK9 328 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 ZHX1-C8orf76Q96EF9 292 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 ARL5BQ96KC2 179 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 TMEM126AQ9H061 195 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 RREB1Q92766 1687 aa-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 USP9XQ93008 2570 aaPredicted RBP-3.21□□□□□ -2.92
LMBR1-222ENST00000638959 A0A1B0GV50 99 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 RAB19A4D1S5 217 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 STAG3L2P0CL84 134 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 STAG3L3P0CL85 134 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 SRIP30626 198 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 EMX2Q04743 252 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 FAM74A4Q5TZK3 123 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 COA4Q9NYJ1 87 aa-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 MRM2Q9UI43 246 aaKnown RBP-3.22□□□□□ -2.92
LMBR1-222ENST00000638959 CPDO75976 1380 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 FXYD6-FXYD2A0A087WZ82 144 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 CST4P01036 141 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 IGF2P01344 180 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 TCRBP04435 133 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 PTNP21246 168 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 GCHFRP30047 84 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 SRP14P37108 136 aaKnown RBP-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 RPL5P46777 297 aaKnown RBP-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 MARCKSL1P49006 195 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 BLMP54132 1417 aaPredicted RBP-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 MYL5Q02045 173 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 TNFAIP8L2Q6P589 184 aaPredicted RBP-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 Q6ZRX8 168 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 CHCHD1Q96BP2 118 aaKnown RBP-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 SERPINB11Q96P15 392 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 CST11Q9H112 138 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 DOCK5Q9H7D0 1870 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 TMEM242Q9NWH2 141 aa-3.23□□□□□ -2.93
LMBR1-222ENST00000638959 hDV103S1A0JD37 113 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 HLA-DRB1P01911 266 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 PHBP35232 272 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 CLDN12P56749 244 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 KRR1Q13601 381 aaKnown RBP-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 DIAPH2-AS1Q14236 149 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 DNM1P34Q6PK57 102 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 LRRN1Q6UXK5 716 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 FAM172AQ8WUF8 416 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 UPF3BQ9BZI7 483 aaKnown RBP-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 PRTFDC1Q9NRG1 225 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 CMTM6Q9NX76 183 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 TMEM56-RWDD3S4R434 201 aa-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 DSPP15924 2871 aaKnown RBP-3.24□□□□□ -2.93
LMBR1-222ENST00000638959 MKRN2OSH3BPM6 223 aa-3.25□□□□□ -2.93
LMBR1-222ENST00000638959 RAB5BP61020 215 aa-3.25□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms