RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 SSBP3-AS1Q7Z2R9 100 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 UBE2DNLQ8IWF7 75 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 Q8IYB0 196 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 CLDN22Q8N7P3 220 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 OR10J5Q8NHC4 309 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 TERB2Q8NHR7 220 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 TEX47Q8TBZ9 253 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 ISOC1Q96CN7 298 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 BPESC1Q9GZL8 116 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 CCDC90BQ9GZT6 254 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 C6orf62Q9GZU0 229 aaPredicted RBP-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 TCEAL2Q9H3H9 227 aaPredicted RBP-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 TMEM14BQ9NUH8 114 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 TAS2R7Q9NYW3 318 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 OR52A1Q9UKL2 312 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 SPCS1Q9Y6A9 102 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 SOGA1O94964 1423 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 FMN1Q68DA7 1419 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 C10orf71Q711Q0 1435 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 LAMC3Q9Y6N6 1575 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 NHSL1Q5SYE7 1610 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 LOC285556D6RIA3 1793 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 PLXND1Q9Y4D7 1925 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 SCN10AQ9Y5Y9 1956 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 NINQ8N4C6 2090 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 EYSQ5T1H1 3165 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 MYO15AQ9UKN7 3530 aa-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 SMG1Q96Q15 3661 aaKnown RBP-0.25□□□□□ -2.45
CCDC7-211ENST00000638889 ATMQ13315 3056 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 UNC13BO14795 1591 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 ANKRD50Q9ULJ7 1429 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 PIK3R4Q99570 1358 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 A0A087X0T9 212 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 A0A096LPI6 279 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TRAV3A0A0B4J244 114 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TRAV17A0A0B4J275 112 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TCRBV4S1A1TA0A5B7 111 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 FAM92AA1XBS5 289 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C9orf92A6NGG3 77 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C9JAW5 83 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 BUB1B-PAK6H3BSN5 160 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 SYS1-DBNDD2H3BUS1 97 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 LYRM1O43325 122 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 NCR2O95944 276 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TCL1BO95988 128 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 HAND1O96004 215 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 IGHV3-33P01772 117 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 MPC1LP0DKB6 136 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 MT1GP13640 62 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 COX7CP15954 63 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 EVI2AP22794 236 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 RPS3P23396 243 aaKnown RBP eCLIP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 GCHFRP30047 84 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 S100A3P33764 101 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 BASP1P80723 227 aaKnown RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 HAMPP81172 84 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 KLRD1Q13241 179 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 DEFB110Q30KQ9 67 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 ACOT6Q3I5F7 207 aaPredicted RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 PIGYQ3MUY2 71 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C1orf195Q5TG92 126 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 FAM74A4Q5TZK3 123 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C1orf140Q5VVS0 124 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 XAF1Q6GPH4 301 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 PHF5AQ7RTV0 110 aaKnown RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C10orf111Q8N326 155 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 MT1MQ8N339 61 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C12orf45Q8N5I9 185 aaPredicted RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C5orf17Q8NAS9 161 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TMEM229BQ8NBD8 167 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 LINC00301Q8NCQ3 95 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 OR2T35Q8NGX2 323 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 PPTC7Q8NI37 304 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TMEM254Q8TBM7 123 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 MRPL30Q8TCC3 161 aaKnown RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 DDI1Q8WTU0 396 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 MALSU1Q96EH3 234 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 IMP4Q96G21 291 aaKnown RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 LINC00208Q96KT6 92 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 LINC00052Q96N35 136 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 ZNF714Q96N38 554 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TP53RKQ96S44 253 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 LYSMD1Q96S90 227 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 DSCR8Q96T75 97 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 AMELXQ99217 191 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 SDF2Q99470 211 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 C7orf50Q9BRJ6 194 aaKnown RBP-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 LINC00472Q9H8W2 130 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 POPDC3Q9HBV1 291 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TP53AIP1Q9HCN2 124 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 PLEKHJ1Q9NW61 149 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 TMEM242Q9NWH2 141 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 COA4Q9NYJ1 87 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 FBXO5Q9UKT4 447 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 EPDR1Q9UM22 224 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 SLC35A3Q9Y2D2 325 aa-0.26□□□□□ -2.45
CCDC7-211ENST00000638889 FRYQ5TBA9 3013 aa-0.27□□□□□ -2.45
CCDC7-211ENST00000638889 TRANK1O15050 2925 aa-0.27□□□□□ -2.45
CCDC7-211ENST00000638889 PPRC1Q5VV67 1664 aaKnown RBP-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms