RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 IGSF10Q6WRI0 2623 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 IGHV3OR16-8A0A075B7F1 116 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 TRAV40A0A0B4J280 105 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 NPIPB6E9PJ23 425 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 SCGB1D1O95968 90 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 PSG3Q16557 428 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 KLK9Q2XQG4 91 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 CLEC2AQ6UVW9 174 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 KLK9Q9UKQ9 250 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 PSG8Q9UQ74 426 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 A0A1B0GXF2 115 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 NDUFS8O00217 210 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 RPL7P18124 248 aaKnown RBP16.75■□□□□ 0.27
CLN6-224ENST00000638076 ZC2HC1AQ96GY0 325 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 RCHY1Q96PM5 261 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 SSBP4Q9BWG4 385 aaPredicted RBP16.75■□□□□ 0.27
CLN6-224ENST00000638076 SAMD10Q9BYL1 202 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 ZFP30Q9Y2G7 519 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 ABCA2Q9BZC7 2435 aa16.75■□□□□ 0.27
CLN6-224ENST00000638076 CLEC3BP05452 202 aa16.74■□□□□ 0.27
CLN6-224ENST00000638076 Q6ZWC4 215 aa16.74■□□□□ 0.27
CLN6-224ENST00000638076 ZNF664Q8N3J9 261 aa16.74■□□□□ 0.27
CLN6-224ENST00000638076 IGHV4-30-2A0A087WSY4 118 aa16.74■□□□□ 0.27
CLN6-224ENST00000638076 PGLYRP4Q96LB8 373 aa16.74■□□□□ 0.27
CLN6-224ENST00000638076 NOL4LQ96MY1 436 aaPredicted RBP16.74■□□□□ 0.27
CLN6-224ENST00000638076 GFRA4Q9GZZ7 299 aa16.74■□□□□ 0.27
CLN6-224ENST00000638076 ZNF785A8K8V0 405 aa16.73■□□□□ 0.27
CLN6-224ENST00000638076 CD33P20138 364 aa16.73■□□□□ 0.27
CLN6-224ENST00000638076 HBBP68871 147 aa16.73■□□□□ 0.27
CLN6-224ENST00000638076 MOB4Q9Y3A3 225 aa16.73■□□□□ 0.27
CLN6-224ENST00000638076 PSG9Q00887 426 aa16.72■□□□□ 0.27
CLN6-224ENST00000638076 OR4B1Q8NGF8 309 aa16.72■□□□□ 0.27
CLN6-224ENST00000638076 OR2D3Q8NGH3 330 aa16.72■□□□□ 0.27
CLN6-224ENST00000638076 PIFOQ8TCI5 191 aa16.72■□□□□ 0.27
CLN6-224ENST00000638076 NAGKQ9UJ70 344 aa16.72■□□□□ 0.27
CLN6-224ENST00000638076 CELSR1Q9NYQ6 3014 aa16.72■□□□□ 0.27
CLN6-224ENST00000638076 TOMM20LQ6UXN7 152 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 RBPMS2Q6ZRY4 209 aaKnown RBP16.71■□□□□ 0.27
CLN6-224ENST00000638076 KCNS1Q96KK3 526 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 CSN1S1P47710 185 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 C18orf32Q8TCD1 76 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 CCDC140Q96MF4 163 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 SMAD5-AS1Q9Y6J3 95 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 CACNA1BQ00975 2339 aa16.71■□□□□ 0.27
CLN6-224ENST00000638076 FAM231BA6NCW3 169 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 GPX1P07203 203 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 DDTP30046 118 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 PRR31Q5SQ13 230 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 C16orf54Q6UWD8 224 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 CLEC19AQ6UXS0 136 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 SIGLECL1Q8N7X8 197 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 SOX21Q9Y651 276 aaPredicted RBP16.7■□□□□ 0.26
CLN6-224ENST00000638076 A0A1W2PS18 150 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 IGHV4-38-2P0DP08 117 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 ZFAND3Q9H8U3 227 aa16.7■□□□□ 0.26
CLN6-224ENST00000638076 DEFA6Q01524 100 aa16.69■□□□□ 0.26
CLN6-224ENST00000638076 DOPEY1Q5JWR5 2465 aa16.69■□□□□ 0.26
CLN6-224ENST00000638076 S100A7P31151 101 aa16.69■□□□□ 0.26
CLN6-224ENST00000638076 EEF1AKMT3Q96AZ1 226 aa16.69■□□□□ 0.26
CLN6-224ENST00000638076 C8orf49Q96NF6 230 aa16.69■□□□□ 0.26
CLN6-224ENST00000638076 MEGF9Q9H1U4 602 aa16.69■□□□□ 0.26
CLN6-224ENST00000638076 ACACBO00763 2458 aa16.68■□□□□ 0.26
CLN6-224ENST00000638076 SPOCK3Q9BQ16 436 aa16.68■□□□□ 0.26
CLN6-224ENST00000638076 LINC00527Q9UJ94 153 aa16.68■□□□□ 0.26
CLN6-224ENST00000638076 FLNCQ14315 2725 aa16.68■□□□□ 0.26
CLN6-224ENST00000638076 AMTP48728 403 aa16.68■□□□□ 0.26
CLN6-224ENST00000638076 CRIP1P50238 77 aa16.68■□□□□ 0.26
CLN6-224ENST00000638076 ALKBH7Q9BT30 221 aaPredicted RBP16.68■□□□□ 0.26
CLN6-224ENST00000638076 SERTM2A0A1B0GWG4 89 aa16.67■□□□□ 0.26
CLN6-224ENST00000638076 A8MWP6 167 aa16.67■□□□□ 0.26
CLN6-224ENST00000638076 PAX1P15863 534 aa16.67■□□□□ 0.26
CLN6-224ENST00000638076 PMCHP20382 165 aa16.67■□□□□ 0.26
CLN6-224ENST00000638076 IGFL4Q6B9Z1 124 aa16.67■□□□□ 0.26
CLN6-224ENST00000638076 IGKV2-40A0A087WW87 121 aaPredicted RBP16.67■□□□□ 0.26
CLN6-224ENST00000638076 TRAV41A0A0B4J266 112 aa16.67■□□□□ 0.26
CLN6-224ENST00000638076 ZNF705FA8MVS1 300 aaPredicted RBP16.67■□□□□ 0.26
CLN6-224ENST00000638076 IGKV2D-40P01614 121 aaPredicted RBP16.67■□□□□ 0.26
CLN6-224ENST00000638076 ZNF705DP0CH99 300 aaPredicted RBP16.67■□□□□ 0.26
CLN6-224ENST00000638076 ZNF705BP0CI00 300 aaPredicted RBP16.67■□□□□ 0.26
CLN6-224ENST00000638076 TRBV7-1A0A0A6YYK4 115 aa16.66■□□□□ 0.26
CLN6-224ENST00000638076 ZNF324O75467 553 aaPredicted RBP16.66■□□□□ 0.26
CLN6-224ENST00000638076 PRB1P04280 392 aa16.66■□□□□ 0.26
CLN6-224ENST00000638076 MSMBP08118 114 aa16.66■□□□□ 0.26
CLN6-224ENST00000638076 NRGNQ92686 78 aa16.66■□□□□ 0.26
CLN6-224ENST00000638076 BUB3O43684 328 aa16.65■□□□□ 0.26
CLN6-224ENST00000638076 FOXA3P55318 350 aaPredicted RBP16.65■□□□□ 0.26
CLN6-224ENST00000638076 KLF5Q13887 457 aaPredicted RBP16.65■□□□□ 0.26
CLN6-224ENST00000638076 USP9XQ93008 2570 aaPredicted RBP16.65■□□□□ 0.26
CLN6-224ENST00000638076 CHEK1O14757 476 aa16.65■□□□□ 0.26
CLN6-224ENST00000638076 CT45A10P0DMU9 189 aa16.65■□□□□ 0.26
CLN6-224ENST00000638076 FOSL1P15407 271 aa16.65■□□□□ 0.26
CLN6-224ENST00000638076 NRN1Q9NPD7 142 aa16.65■□□□□ 0.26
CLN6-224ENST00000638076 RNF114Q9Y508 228 aa16.65■□□□□ 0.26
CLN6-224ENST00000638076 CLPSL1A2RUU4 121 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 HLA-DMBP28068 263 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 SSTP61278 116 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 ATP5G2Q06055 141 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 LY6EQ16553 131 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 C19orf54Q5BKX5 351 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 ARL6IP6Q8N6S5 226 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms