RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SPINK4O60575 86 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 SRSF1Q07955 248 aaKnown RBP eCLIP9.17□□□□□ -0.94
CLN6-217ENST00000636964 PSG5Q15238 335 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 CD300EQ496F6 205 aaPredicted RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 TEPPQ6URK8 271 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 NAA38Q9BRA0 125 aaKnown RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 DPM3Q9P2X0 92 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 CDC42EP3Q9UKI2 254 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 OVOL3O00110 214 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 ACTL6BO94805 426 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 PRTN3P24158 256 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
CLN6-217ENST00000636964 OR2T6Q8NHC8 308 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 NRGNQ92686 78 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 KCNIP2Q9NS61 270 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 PSG9Q00887 426 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 SIGLEC9Q9Y336 463 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 LSM4Q9Y4Z0 139 aaKnown RBP9.16□□□□□ -0.94
CLN6-217ENST00000636964 YTHDF2Q9Y5A9 579 aaKnown RBP9.16□□□□□ -0.94
CLN6-217ENST00000636964 IGKV1OR2-108A0A075B7D4 117 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 M0R1W7 72 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 PLGLAQ15195 96 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 C2orf83Q53S99 150 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 OR11H6Q8NGC7 330 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
CLN6-217ENST00000636964 V9GYV3 84 aa9.16□□□□□ -0.94
CLN6-217ENST00000636964 TAX1BP3O14907 124 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 ZNF324O75467 553 aaPredicted RBP9.15□□□□□ -0.94
CLN6-217ENST00000636964 LMO4P61968 165 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 SLC35B1P78383 322 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 DYNAPQ8N1N2 210 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 ZNF843Q8N446 348 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 CCL19Q99731 98 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 CREBBPQ92793 2442 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 IGHV3-21A0A0B4J1V1 117 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 A1L4Q6 167 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 MPDU1O75352 247 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 AREGP15514 252 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 IGLL1P15814 213 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 OPRK1P41145 380 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 HES1Q14469 280 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 TMEM136Q6ZRR5 245 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 STPG3Q8N7X2 389 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
CLN6-217ENST00000636964 IGLC1P0CG04 106 aa9.15□□□□□ -0.95
CLN6-217ENST00000636964 ASPHD1Q5U4P2 390 aa9.15□□□□□ -0.95
CLN6-217ENST00000636964 PPP1R27Q86WC6 154 aa9.15□□□□□ -0.95
CLN6-217ENST00000636964 KIR3DL3Q8N743 410 aa9.15□□□□□ -0.95
CLN6-217ENST00000636964 TEX45Q8NA69 505 aa9.15□□□□□ -0.95
CLN6-217ENST00000636964 NPIPB5A8MRT5 1133 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 BMPR1BO00238 502 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 MMD2Q8IY49 270 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 NDFIP1Q9BT67 221 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 FNDC4Q9H6D8 234 aaPredicted RBP9.14□□□□□ -0.95
CLN6-217ENST00000636964 CELSR2Q9HCU4 2923 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 CRYGBP07316 175 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
CLN6-217ENST00000636964 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
CLN6-217ENST00000636964 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
CLN6-217ENST00000636964 CD69Q07108 199 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 EBLN2Q6P2I7 272 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 KLHDC1Q8N7A1 406 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 ANAPC13Q9BS18 74 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
CLN6-217ENST00000636964 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 TMEM160Q9NX00 188 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 ODF3BA8MYP8 253 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
CLN6-217ENST00000636964 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 SRIP30626 198 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 FOXE3Q13461 319 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 OR10J3Q5JRS4 329 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 CFHR4Q92496 578 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 SIRPDQ9H106 197 aa9.13□□□□□ -0.95
CLN6-217ENST00000636964 MFAP2P55001 183 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 NAT8BQ9UHF3 227 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 SONP18583 2426 aaKnown RBP9.12□□□□□ -0.95
CLN6-217ENST00000636964 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.12□□□□□ -0.95
CLN6-217ENST00000636964 FOXH1O75593 365 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 LINC00869P0C866 280 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 FAM168AQ92567 244 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 PERPQ96FX8 193 aa9.12□□□□□ -0.95
CLN6-217ENST00000636964 TRAV9-1A0A075B6T8 112 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 SUB1P53999 127 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLN6-217ENST00000636964 SRSF12Q8WXF0 261 aaKnown RBP9.11□□□□□ -0.95
CLN6-217ENST00000636964 IGHV3OR16-10A0A075B7F0 116 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 IGHV4-61A0A0C4DH41 118 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 NTF3P20783 257 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms