RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 BCL6BQ8N143 479 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 PSME4Q14997 1843 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 A0A1B0GW15 77 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 C9JAW5 83 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 DUX4L9Q6RFH8 374 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 PRSS57Q6UWY2 283 aa14.47□□□□□ -0.09
CACNA1A-227ENST00000636549 CRYGCP07315 174 aa14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 LINC00479Q96M42 142 aa14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 DAZ1Q9NQZ3 744 aaKnown RBP14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 CRLF1O75462 422 aa14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 BAALCQ8WXS3 180 aa14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 PARP14Q460N5 1801 aa14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 CHKB-CPT1BH3BT56 60 aa14.46□□□□□ -0.09
CACNA1A-227ENST00000636549 ERVH48-1M5A8F1 160 aa14.46□□□□□ -0.1
CACNA1A-227ENST00000636549 SLC25A48Q6ZT89 311 aaKnown RBP14.46□□□□□ -0.1
CACNA1A-227ENST00000636549 GAS1P54826 345 aa14.46□□□□□ -0.1
CACNA1A-227ENST00000636549 ARTNQ5T4W7 220 aa14.46□□□□□ -0.1
CACNA1A-227ENST00000636549 IGKV1-9A0A0C4DH69 117 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 MYMXA0A1B0GTQ4 84 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 TP53TG1Q9Y2A0 90 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 SHISA3A0PJX4 238 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 LAMTOR2Q9Y2Q5 125 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 ZFP36L1Q07352 338 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 LIME1Q9H400 295 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 TEX36Q5VZQ5 186 aa14.45□□□□□ -0.1
CACNA1A-227ENST00000636549 TEX48A0A1B0GUV7 120 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 ARMS2P0C7Q2 107 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 PLSCR4Q9NRQ2 329 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 ARFGEF3Q5TH69 2177 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 GGNQ86UU5 652 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 TMEM213A2RRL7 107 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 A0A1B0GWJ7 208 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 TREML4Q6UXN2 200 aa14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 XIRP1Q702N8 1843 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 HEATR1Q9H583 2144 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-227ENST00000636549 PLEKHB2Q96CS7 222 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 MINOS1Q5TGZ0 78 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 USMG5Q96IX5 58 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 MINOS1-NBL1R4GNA1 71 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 DOCK7Q96N67 2140 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 SIGLEC9Q9Y336 463 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 RBBP6Q7Z6E9 1792 aaKnown RBP14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 PTPRFP10586 1907 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 A0A1B0GTI1 187 aa14.43□□□□□ -0.1
CACNA1A-227ENST00000636549 IL18BPO95998 194 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 IGKV1-27A0A075B6S5 117 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 IGKV1-16P04430 117 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 ZFAND6Q6FIF0 208 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 TSKUQ8WUA8 353 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 MYO7BQ6PIF6 2116 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 ATP5IP56385 69 aaPredicted RBP14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 IGKV1-12A0A0C4DH73 117 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 POLEQ07864 2286 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 NUP35Q8NFH5 326 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 TNFRSF14Q92956 283 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 SIGMAR1Q99720 223 aa14.42□□□□□ -0.1
CACNA1A-227ENST00000636549 IGHV1-69DA0A0B4J2H0 117 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 A0A1B0GUS0 222 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 LINC00473A8K010 186 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 IGHV1-69P01742 117 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 C8orf86Q6ZUL3 223 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 RNF144BQ7Z419 303 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 STPG4Q8N801 248 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 GAGE2BQ13066 116 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 DSCR8Q96T75 97 aa14.41□□□□□ -0.1
CACNA1A-227ENST00000636549 BUB3O43684 328 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 C9orf153Q5TBE3 101 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 SEC16AO15027 2179 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 GTF3C1Q12789 2109 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 REG4Q9BYZ8 158 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 TIRAPP58753 221 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 TMEM243Q9BU79 118 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 FAM90A9PA6NNJ1 464 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 M0R1W7 72 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 COL4A6Q14031 1691 aa14.4□□□□□ -0.1
CACNA1A-227ENST00000636549 ATRAIDQ6UW56 229 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 SIPA1L3O60292 1781 aaPredicted RBP14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 NDUFB8O95169 186 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 HLA-DRB4P13762 266 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 ZFP36P26651 326 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 HLA-DRB4X5D2U9 266 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 INTS1Q8N201 2190 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 NHLRC3Q5JS37 347 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 KLHDC3Q9BQ90 382 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 RNASE2P10153 161 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 SEC11AP67812 179 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 DOCK10Q96BY6 2186 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 IGKV1D-17A0A075B6S4 117 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 NDUFS7O75251 213 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 RMI2Q96E14 147 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 THSD7AQ9UPZ6 1657 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 DNAJC30Q96LL9 226 aa14.39□□□□□ -0.11
CACNA1A-227ENST00000636549 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 C9orf139Q6ZV77 190 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 ZNF503Q96F45 646 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 LINC00587B1AMM8 73 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 SLURP1P55000 103 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 MPV17L2Q567V2 206 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 SPATA25Q9BR10 227 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 ALPK2Q86TB3 2170 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms