RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 A0A0U1RRA0 63 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 FCN3O75636 299 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 IGLV3-1P01715 115 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 MRAP2Q96G30 205 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 IGHV3-73A0A0B4J1V6 119 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 D6R8Y8 96 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
GABRB3-219ENST00000636466 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 FAM169BQ8N8A8 192 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
GABRB3-219ENST00000636466 MED12LQ86YW9 2145 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 EML6Q6ZMW3 1958 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 TRAV21A0A0B4J279 112 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 TYMSP04818 313 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 OR10J3Q5JRS4 329 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 TEX29Q8N6K0 151 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 NDUFAF3Q9BU61 184 aa11.47□□□□□ -0.57
GABRB3-219ENST00000636466 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
GABRB3-219ENST00000636466 WT1-ASQ06250 92 aa11.46□□□□□ -0.57
GABRB3-219ENST00000636466 TTC9CQ8N5M4 171 aa11.46□□□□□ -0.57
GABRB3-219ENST00000636466 B4DSR2 109 aa11.46□□□□□ -0.57
GABRB3-219ENST00000636466 COX6CP09669 75 aa11.46□□□□□ -0.57
GABRB3-219ENST00000636466 IGFL3Q6UXB1 125 aa11.46□□□□□ -0.57
GABRB3-219ENST00000636466 A0A1B0GW64 132 aa11.46□□□□□ -0.58
GABRB3-219ENST00000636466 RIPPLY3P57055 190 aa11.46□□□□□ -0.58
GABRB3-219ENST00000636466 NAA38Q9BRA0 125 aaKnown RBP11.46□□□□□ -0.58
GABRB3-219ENST00000636466 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.58
GABRB3-219ENST00000636466 OVOL3O00110 214 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 IGLV1-44P01699 117 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 HBDP02042 147 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 NSUN5P1Q3KNT7 163 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 IGHV3-64A0A075B6Q5 118 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 TCF15Q12870 199 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 ERCC8Q13216 396 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
GABRB3-219ENST00000636466 MKI67P46013 3256 aaKnown RBP11.44□□□□□ -0.58
GABRB3-219ENST00000636466 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
GABRB3-219ENST00000636466 H7C1H1 209 aa11.44□□□□□ -0.58
GABRB3-219ENST00000636466 NDUFB8O95169 186 aa11.44□□□□□ -0.58
GABRB3-219ENST00000636466 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
GABRB3-219ENST00000636466 PAPPA-AS1Q5QFB9 102 aa11.44□□□□□ -0.58
GABRB3-219ENST00000636466 ZNF114Q8NC26 417 aa11.44□□□□□ -0.58
GABRB3-219ENST00000636466 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
GABRB3-219ENST00000636466 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 ATP6V0E1O15342 81 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 STHQ8IWL8 128 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 AMN1Q8IY45 258 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 RNF182Q8N6D2 247 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 A0A1B0GW15 77 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 GATA4P43694 442 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 DKK4Q9UBT3 224 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 FASNP49327 2511 aaKnown RBP11.43□□□□□ -0.58
GABRB3-219ENST00000636466 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 M0R1W7 72 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 TDGF1P13385 188 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 LCNL1Q6ZST4 164 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 NDUFA4L2Q9NRX3 87 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 NHP2Q9NX24 153 aaKnown RBP11.43□□□□□ -0.58
GABRB3-219ENST00000636466 SMIM13P0DJ93 91 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
GABRB3-219ENST00000636466 COTL1Q14019 142 aa11.43□□□□□ -0.58
GABRB3-219ENST00000636466 A6NNC1 897 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 H3BUT2 72 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 C11orf53Q8IXP5 236 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 RNF138Q8WVD3 245 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 ST20Q9HBF5 79 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 SH2D1AO60880 128 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-219ENST00000636466 ZNF562Q6V9R5 426 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-219ENST00000636466 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 RNF5Q99942 180 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
GABRB3-219ENST00000636466 C3orf79P0CE67 100 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 PEMTQ9UBM1 199 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 CHD3Q12873 2000 aaKnown RBP11.41□□□□□ -0.58
GABRB3-219ENST00000636466 GGTLC3B5MD39 225 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 ARMS2P0C7Q2 107 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 SMAGPQ0VAQ4 97 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 LRRK2Q5S007 2527 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 IL15RAQ13261 267 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 VCX2Q9H322 139 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
GABRB3-219ENST00000636466 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 PAX1P15863 534 aa11.41□□□□□ -0.58
GABRB3-219ENST00000636466 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
GABRB3-219ENST00000636466 C5orf42Q9H799 3197 aa11.4□□□□□ -0.58
GABRB3-219ENST00000636466 ACTL10Q5JWF8 245 aa11.4□□□□□ -0.58
GABRB3-219ENST00000636466 ZNF462Q96JM2 2506 aa11.4□□□□□ -0.58
GABRB3-219ENST00000636466 PFN1P07737 140 aaKnown RBP11.4□□□□□ -0.58
GABRB3-219ENST00000636466 UBE2E2Q96LR5 201 aa11.4□□□□□ -0.58
GABRB3-219ENST00000636466 NXT2Q9NPJ8 142 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms