RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 MOB3BQ86TA1 216 aa12.26□□□□□ -0.45
CLN8-209ENST00000635970 TEX29Q8N6K0 151 aa12.26□□□□□ -0.45
CLN8-209ENST00000635970 VSTM2AQ8TAG5 236 aa12.26□□□□□ -0.45
CLN8-209ENST00000635970 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
CLN8-209ENST00000635970 TMEM70Q9BUB7 260 aa12.26□□□□□ -0.45
CLN8-209ENST00000635970 ZNF430Q9H8G1 570 aaPredicted RBP12.26□□□□□ -0.45
CLN8-209ENST00000635970 KLF12Q9Y4X4 402 aa12.26□□□□□ -0.45
CLN8-209ENST00000635970 TCRBV4S1A1TA0A5B7 111 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 SRRM4A7MD48 611 aaKnown RBP12.25□□□□□ -0.45
CLN8-209ENST00000635970 CCL25O15444 150 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 SAA1P0DJI8 122 aaPredicted RBP12.25□□□□□ -0.45
CLN8-209ENST00000635970 MYOD1P15172 320 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 COX7A1P24310 79 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 RPS20P60866 119 aaKnown RBP12.25□□□□□ -0.45
CLN8-209ENST00000635970 ZNF833PQ6ZTB9 187 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 THAP8Q8NA92 274 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 MYCNOSP40205 109 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 RPL8P62917 257 aaKnown RBP12.25□□□□□ -0.45
CLN8-209ENST00000635970 UTF1Q5T230 341 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 EBLN2Q6P2I7 272 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 OR4F17Q8NGA8 305 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 GFRA4Q9GZZ7 299 aa12.25□□□□□ -0.45
CLN8-209ENST00000635970 A8MWL6 223 aa12.24□□□□□ -0.45
CLN8-209ENST00000635970 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
CLN8-209ENST00000635970 IGKV1-16P04430 117 aa12.24□□□□□ -0.45
CLN8-209ENST00000635970 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
CLN8-209ENST00000635970 IGLL1P15814 213 aa12.24□□□□□ -0.45
CLN8-209ENST00000635970 HINT1P49773 126 aaPredicted RBP12.24□□□□□ -0.45
CLN8-209ENST00000635970 HBBP68871 147 aa12.24□□□□□ -0.45
CLN8-209ENST00000635970 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
CLN8-209ENST00000635970 JMJD1CQ15652 2540 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 RBP4P02753 201 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 Q56UQ5 140 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 GDF5OSQ5U4N7 250 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
CLN8-209ENST00000635970 PRIMA1Q86XR5 153 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 FXYD5Q96DB9 178 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 GPR82Q96P67 336 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 ETFRF1Q6IPR1 90 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 LCN12Q6JVE5 192 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 PDPNQ86YL7 162 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 TMEM167AQ8TBQ9 72 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 ZNF48Q96MX3 618 aaPredicted RBP12.23□□□□□ -0.45
CLN8-209ENST00000635970 ZNF492Q9P255 531 aa12.23□□□□□ -0.45
CLN8-209ENST00000635970 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 TRAV5A0A0B4J249 113 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 UBE2E1P51965 193 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 SRSF2Q01130 221 aaKnown RBP12.22□□□□□ -0.45
CLN8-209ENST00000635970 OR5AN1Q8NGI8 311 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 FMC1Q96HJ9 113 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 LINC00479Q96M42 142 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 HARBI1Q96MB7 349 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 PRSS22Q9GZN4 317 aa12.22□□□□□ -0.45
CLN8-209ENST00000635970 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 NPFFO15130 113 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 SAA4P35542 130 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 CDKN1BP46527 198 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 GNG10P50151 68 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 MLANAQ16655 118 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 ANKRD39Q53RE8 183 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 C9orf139Q6ZV77 190 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 OR2T6Q8NHC8 308 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 MLST8Q9BVC4 326 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 TMEM133Q9H2Q1 129 aa12.21□□□□□ -0.45
CLN8-209ENST00000635970 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.45
CLN8-209ENST00000635970 DEFB112Q30KQ8 113 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 FBLN7Q53RD9 439 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 MORN5Q5VZ52 161 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 OR4C13Q8NGP0 309 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 FLYWCH2Q96CP2 140 aaKnown RBP12.21□□□□□ -0.46
CLN8-209ENST00000635970 NDFIP1Q9BT67 221 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 ZNRD1Q9P1U0 126 aa12.21□□□□□ -0.46
CLN8-209ENST00000635970 PYYP10082 97 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 RBX1P62877 108 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 SAPCD1Q5SSQ6 148 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 UNQ5815/PRO19632Q6UWF5 114 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 PATE2Q6UY27 113 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 TMEM191AQ9H0A3 160 aa12.2□□□□□ -0.46
CLN8-209ENST00000635970 OR4C46A6NHA9 309 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 HSBP1L1C9JCN9 74 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 CAMPP49913 170 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 SCGB2A2Q13296 93 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 LDLRAD2Q5SZI1 272 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 LHFPL4Q7Z7J7 247 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 C8orf31Q8N9H6 132 aa12.19□□□□□ -0.46
CLN8-209ENST00000635970 MS4A6AQ9H2W1 248 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms