RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
LIMS4-203ENST00000632758 HBE1P02100 147 aa11.11□□□□□ -0.63
LIMS4-203ENST00000632758 TFPI2P48307 235 aa11.11□□□□□ -0.63
LIMS4-203ENST00000632758 CLLU1Q5K131 121 aa11.11□□□□□ -0.63
LIMS4-203ENST00000632758 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
LIMS4-203ENST00000632758 MS4A6AQ9H2W1 248 aa11.11□□□□□ -0.63
LIMS4-203ENST00000632758 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
LIMS4-203ENST00000632758 DNHD1Q96M86 4753 aa11.1□□□□□ -0.63
LIMS4-203ENST00000632758 UBE2G2P60604 165 aa11.1□□□□□ -0.63
LIMS4-203ENST00000632758 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
LIMS4-203ENST00000632758 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
LIMS4-203ENST00000632758 TMEM167BQ9NRX6 74 aa11.1□□□□□ -0.63
LIMS4-203ENST00000632758 PRB4P10163 310 aaPredicted RBP11.09□□□□□ -0.63
LIMS4-203ENST00000632758 HLA-DMBP28068 263 aa11.09□□□□□ -0.63
LIMS4-203ENST00000632758 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
LIMS4-203ENST00000632758 DCANP1Q8TF63 244 aa11.09□□□□□ -0.63
LIMS4-203ENST00000632758 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
LIMS4-203ENST00000632758 YTHDF2Q9Y5A9 579 aaKnown RBP11.09□□□□□ -0.63
LIMS4-203ENST00000632758 TRAV8-2A0A0B4J237 113 aa11.08□□□□□ -0.64
LIMS4-203ENST00000632758 DNASE2O00115 360 aaPredicted RBP11.08□□□□□ -0.64
LIMS4-203ENST00000632758 SOCS3O14543 225 aa11.08□□□□□ -0.64
LIMS4-203ENST00000632758 TSPAN4O14817 238 aa11.08□□□□□ -0.64
LIMS4-203ENST00000632758 CD5P06127 495 aa11.08□□□□□ -0.64
LIMS4-203ENST00000632758 PSMB3P49720 205 aa11.08□□□□□ -0.64
LIMS4-203ENST00000632758 FAM24BQ8N5W8 94 aa11.08□□□□□ -0.64
LIMS4-203ENST00000632758 MCRIP2Q9BUT9 160 aaKnown RBP11.08□□□□□ -0.64
LIMS4-203ENST00000632758 PAGE4O60829 102 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 INSL3P51460 131 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 GUK1Q16774 197 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 HAGHQ16775 308 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 OXLD1Q5BKU9 147 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 ZNF331Q9NQX6 463 aaPredicted RBP11.07□□□□□ -0.64
LIMS4-203ENST00000632758 TRAV25A0A0B4J276 109 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 FAM74A7A6NL05 159 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 K7EQG2 157 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 GUCA2BQ16661 112 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 PRR31Q5SQ13 230 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 RNF182Q8N6D2 247 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 RARRES2Q99969 163 aa11.07□□□□□ -0.64
LIMS4-203ENST00000632758 NOTCH3Q9UM47 2321 aa11.06□□□□□ -0.64
LIMS4-203ENST00000632758 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
LIMS4-203ENST00000632758 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
LIMS4-203ENST00000632758 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
LIMS4-203ENST00000632758 Q9H3A6 140 aa11.06□□□□□ -0.64
LIMS4-203ENST00000632758 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
LIMS4-203ENST00000632758 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 PGPA6NDG6 321 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 ATP5G3P48201 142 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 MEOX2P50222 304 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 PMS2P11Q13670 270 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 PDE6HQ13956 83 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 ICAM4Q14773 271 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 CST9LP1Q5W188 147 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 OR2K2Q8NGT1 345 aa11.05□□□□□ -0.64
LIMS4-203ENST00000632758 SPAG8Q99932 426 aaPredicted RBP11.05□□□□□ -0.64
LIMS4-203ENST00000632758 RBFOX3A6NFN3 312 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 ZNF705FA8MVS1 300 aaPredicted RBP11.04□□□□□ -0.64
LIMS4-203ENST00000632758 GGTLC3B5MD39 225 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 M0R3E3 92 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 ZNF253O75346 499 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 PPT1P50897 306 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 PSG9Q00887 426 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 LCN12Q6JVE5 192 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 LINC00052Q96N35 136 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
LIMS4-203ENST00000632758 LOC102723971A0A1B0GUV8 181 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 BCL2P10415 239 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 DEFB1P60022 68 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 SRSF3P84103 164 aaKnown RBP11.03□□□□□ -0.64
LIMS4-203ENST00000632758 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 LYPD1Q8N2G4 141 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 OTORQ9NRC9 128 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 ISLRO14498 428 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 WIPF1O43516 503 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 IFNA1P01562 189 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 ID1P41134 155 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 BEAN1Q3B7T3 259 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 CCDC28AQ8IWP9 274 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 RXFP4Q8TDU9 374 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 AAMDCQ9H7C9 122 aa11.03□□□□□ -0.64
LIMS4-203ENST00000632758 PKD1L1Q8TDX9 2849 aa11.02□□□□□ -0.64
LIMS4-203ENST00000632758 OR4C46A6NHA9 309 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 C11orf94C9JXX5 98 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 PRAC2D3DTV9 90 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 G3V4G9 280 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 CD7P09564 240 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 CD81P60033 236 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 GNG5P63218 68 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 PSG3Q16557 428 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 PSMG4Q5JS54 123 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 ZNF506Q5JVG8 444 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 EIF5A2Q9GZV4 153 aaKnown RBP11.02□□□□□ -0.65
LIMS4-203ENST00000632758 VAX2Q9UIW0 290 aa11.02□□□□□ -0.65
LIMS4-203ENST00000632758 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms