RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TMEM30BQ3MIR4 351 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 ANXA2RQ3ZCQ2 193 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 C9orf139Q6ZV77 190 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 ORAOV1Q8WV07 137 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 H1FXQ92522 213 aaKnown RBP9.19□□□□□ -0.94
LINC00538-201ENST00000626109 C20orf144Q9BQM9 153 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 DCTN5Q9BTE1 182 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 CALYQ9NYX4 217 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 A0A096LNT2 108 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 TRGV10A0A0A0MS01 117 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 LINC00205P59089 165 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 PXMP4Q9Y6I8 212 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 NBPF19A0A087WUL8 3843 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 MDFIC2A0A1B0GVS7 189 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 FNDC10F2Z333 226 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 PROP1O75360 226 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 ELANEP08246 267 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 AZU1P20160 251 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 HSPE1P61604 102 aaKnown RBP9.18□□□□□ -0.94
LINC00538-201ENST00000626109 RPL39P5Q59GN2 51 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 LDLRAD2Q5SZI1 272 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 Q8N7P7 452 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 IFI27L2Q9H2X8 130 aa9.18□□□□□ -0.94
LINC00538-201ENST00000626109 C15orf61A6NNL5 157 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 RRHO14718 337 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 TRIAP1O43715 76 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 NDUFB4O95168 129 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GNB1P62873 340 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 JOSD1Q15040 202 aaPredicted RBP9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 DDB2Q92466 427 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 TMEM18Q96B42 140 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 MGST2Q99735 147 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GGTLC1Q9BX51 225 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 PRNDQ9UKY0 176 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 PDZD2O15018 2839 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 KIAA2026Q5HYC2 2103 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 hADV38S2A0JD32 116 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 GATA3P23771 443 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 NPY1RP25929 384 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 MEF2CQ06413 473 aaPredicted RBP9.17□□□□□ -0.94
LINC00538-201ENST00000626109 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 MAPK1IP1LQ8NDC0 245 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 FKBP11Q9NYL4 201 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 FUT9Q9Y231 359 aa9.17□□□□□ -0.94
LINC00538-201ENST00000626109 PRRC2AP48634 2157 aaKnown RBP9.16□□□□□ -0.94
LINC00538-201ENST00000626109 ITPR2Q14571 2701 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 B4DSR2 109 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 IL6RP08887 468 aaPredicted RBP9.16□□□□□ -0.94
LINC00538-201ENST00000626109 ARL14EPLP0DKL9 152 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 CGB3P0DN86 165 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 CGB7P0DN87 165 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 NPPCP23582 126 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 RPL29P47914 159 aaKnown RBP9.16□□□□□ -0.94
LINC00538-201ENST00000626109 ATP5G3P48201 142 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 MIC13Q5XKP0 118 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 TMEM14BQ9NUH8 114 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 RPUSD1Q9UJJ7 312 aaKnown RBP9.16□□□□□ -0.94
LINC00538-201ENST00000626109 TRAPPC1Q9Y5R8 145 aa9.16□□□□□ -0.94
LINC00538-201ENST00000626109 OR7C2O60412 319 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 AMBPP02760 352 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.94
LINC00538-201ENST00000626109 GNG5P63218 68 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 C17orf58Q2M2W7 97 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 C11orf42Q8N5U0 333 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 C8orf46Q8TAG6 207 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 FBXL15Q9H469 300 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 LINC00312Q9Y6C7 94 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 LY96Q9Y6Y9 160 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 ARL2-SNX15V9GYD0 113 aa9.15□□□□□ -0.94
LINC00538-201ENST00000626109 FLNBO75369 2602 aaKnown RBP9.15□□□□□ -0.94
LINC00538-201ENST00000626109 CRXO43186 299 aaPredicted RBP9.15□□□□□ -0.95
LINC00538-201ENST00000626109 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.95
LINC00538-201ENST00000626109 MSMBP08118 114 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 RTL8BQ17RB0 113 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 CT45A1Q5HYN5 189 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 TPTE2P1Q5T6R2 138 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 CT45A3Q8NHU0 189 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 C19orf24Q9BVV8 132 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 NPFFR1Q9GZQ6 430 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 ZNF257Q9Y2Q1 563 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 OR51B2Q9Y5P1 312 aa9.15□□□□□ -0.95
LINC00538-201ENST00000626109 SAA2-SAA4A0A096LPE2 208 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 TRAV3A0A0B4J244 114 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 IGHV2-70DA0A0C4DH43 119 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 RHODO00212 210 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 SAA2P0DJI9 122 aaPredicted RBP9.14□□□□□ -0.95
LINC00538-201ENST00000626109 IGHV4-31P0DP07 118 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 GCHFRP30047 84 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 OR5I1Q13606 314 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 CIARTQ8N365 385 aaPredicted RBP9.14□□□□□ -0.95
LINC00538-201ENST00000626109 LY6G5BQ8NDX9 201 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 OR10G8Q8NGN5 311 aa9.14□□□□□ -0.95
LINC00538-201ENST00000626109 SGMS2Q8NHU3 365 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms