RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SSBP4Q9BWG4 385 aaPredicted RBP6.54□□□□□ -1.36
SND1-IT1-201ENST00000623342 C21orf62Q9NYP8 219 aa6.54□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZMAT5Q9UDW3 170 aaKnown RBP6.54□□□□□ -1.36
SND1-IT1-201ENST00000623342 IGHV2-70DA0A0C4DH43 119 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 K7EQM0 130 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 KRTDAPP60985 99 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 RBPMS2Q6ZRY4 209 aaKnown RBP6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZNF414Q96IQ9 312 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 ALKBH7Q9BT30 221 aaPredicted RBP6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 PRORYQ9H606 182 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 DOPEY1Q5JWR5 2465 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 FAM106CPP0CH98 169 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 PGLYRP4Q96LB8 373 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 ZFP30Q9Y2G7 519 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 RNF114Q9Y508 228 aa6.53□□□□□ -1.36
SND1-IT1-201ENST00000623342 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 DIRC3C9JPN6 131 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 SCGB2A1O75556 95 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 NDUFB8O95169 186 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 EGR2P11161 476 aaPredicted RBP6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 UBE2E1P51965 193 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 PDE6HQ13956 83 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 C16orf54Q6UWD8 224 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 NIT1Q86X76 327 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 Q8N9W7 124 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 ITLN2Q8WWU7 325 aaPredicted RBP6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 C20orf144Q9BQM9 153 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 VAMP8Q9BV40 100 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 UBR5O95071 2799 aaPredicted RBP6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 USP9YO00507 2555 aaPredicted RBP6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 PSG3Q16557 428 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 TDRG1Q3Y452 100 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 BCL6BQ8N143 479 aaPredicted RBP6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 Q8N976 141 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 AAMDCQ9H7C9 122 aa6.52□□□□□ -1.37
SND1-IT1-201ENST00000623342 HSBP1O75506 76 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 IGHV3-23P01764 117 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 NTF3P20783 257 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 FAM120AOSQ5T036 256 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 TXN2Q99757 166 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 CUBNO60494 3623 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 A0A1B0GV90 55 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 OR2T8A6NH00 312 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 ZNF785A8K8V0 405 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 FOXA3P55318 350 aaPredicted RBP6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 LMO4P61968 165 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 PSG9Q00887 426 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 Q71RC1 249 aaPredicted RBP6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 LINC00469Q8N7U9 141 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 BPESC1Q9GZL8 116 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
SND1-IT1-201ENST00000623342 SERTM2A0A1B0GWG4 89 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 M0R3E3 92 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 CTSGP08311 255 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 C3orf79P0CE67 100 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 RPL7P18124 248 aaKnown RBP6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 SAA4P35542 130 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 CSN1S1P47710 185 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 FAM162BQ5T6X4 162 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 RNASEKQ6P5S7 137 aaKnown RBP6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 FAM110DQ8TAY7 271 aaPredicted RBP6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 LPAR2Q9HBW0 351 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 C19orf84I3L1E1 186 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 M0R2Z0 102 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 CHEK1O14757 476 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 GNLYP22749 145 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 MIEN1Q9BRT3 115 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 RABAC1Q9UI14 185 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 ABCA2Q9BZC7 2435 aa6.5□□□□□ -1.37
SND1-IT1-201ENST00000623342 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 PTPN13Q12923 2485 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 SH2D7A6NKC9 451 aaPredicted RBP6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 M0R143 59 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 EREGO14944 169 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 S100A7P31151 101 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 ZNF705AQ6ZN79 300 aaPredicted RBP6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 ASCL2Q99929 193 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 LOC102724200A0A096LPH7 203 aaPredicted RBP6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 A0A1B0GUT8 65 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 OVOL3O00110 214 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 NPFFO15130 113 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 CT45A10P0DMU9 189 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 PRB4P10163 310 aaPredicted RBP6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 CRIP1P50238 77 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 ECSCRQ19T08 205 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 KLK9Q2XQG4 91 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 ARL6IP6Q8N6S5 226 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms