RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 C1orf196B1AJZ1 125 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 HIST1H1BP16401 226 aaKnown RBP8.14□□□□□ -1.11
VPS11-208ENST00000621676 ZNF124Q15973 351 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 KRTAP1-3Q8IUG1 177 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 WIPF2Q8TF74 440 aaPredicted RBP8.14□□□□□ -1.11
VPS11-208ENST00000621676 VGLL1Q99990 258 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 PITPNC1Q9UKF7 332 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 TRAV1-1A0A0B4J248 108 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 PEX7O00628 323 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 MAS1LP35410 378 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 SLURP1P55000 103 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 TTC9CQ8N5M4 171 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 OR10G8Q8NGN5 311 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 DPF1Q92782 380 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 TRGV9Q99603 122 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 AP4M1O00189 453 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 GOSR1O95249 250 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 RPEL1Q2QD12 228 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 SFRP2Q96HF1 295 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 ESM1Q9NQ30 184 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 ZMAT5Q9UDW3 170 aaKnown RBP8.13□□□□□ -1.11
VPS11-208ENST00000621676 ELOA3CA0A087WX78 387 aaPredicted RBP8.13□□□□□ -1.11
VPS11-208ENST00000621676 A0A096LNT2 108 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 ZNF688P0C7X2 276 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 EEF1AKMT3Q96AZ1 226 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 PGLYRP4Q96LB8 373 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 SRD5A3Q9H8P0 318 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 PSMB11A5LHX3 300 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 A6NDX4 124 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 CRYGCP07315 174 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 MEOX2P50222 304 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 FOXA3P55318 350 aaPredicted RBP8.13□□□□□ -1.11
VPS11-208ENST00000621676 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 C16orf92Q96LL3 132 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 RNF2Q99496 336 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 EPDR1Q9UM22 224 aa8.13□□□□□ -1.11
VPS11-208ENST00000621676 S100PP25815 95 aa8.12□□□□□ -1.11
VPS11-208ENST00000621676 IBA57Q5T440 356 aaKnown RBP8.12□□□□□ -1.11
VPS11-208ENST00000621676 DAZAP1Q96EP5 407 aaKnown RBP8.12□□□□□ -1.11
VPS11-208ENST00000621676 GPR61Q9BZJ8 451 aa8.12□□□□□ -1.11
VPS11-208ENST00000621676 PKD1L1Q8TDX9 2849 aa8.12□□□□□ -1.11
VPS11-208ENST00000621676 PDE6DO43924 150 aa8.12□□□□□ -1.11
VPS11-208ENST00000621676 FAM110DQ8TAY7 271 aaPredicted RBP8.12□□□□□ -1.11
VPS11-208ENST00000621676 RNF5Q99942 180 aa8.12□□□□□ -1.11
VPS11-208ENST00000621676 M0QZ24 198 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 BMPR1BO00238 502 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 CSN3P07498 182 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 ZNF502Q8TBZ5 544 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 NEU1Q99519 415 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 CYSRT1A8MQ03 144 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 H0Y8G0 127 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 ORM1P02763 201 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 DSCR9P59020 149 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 THAP8Q8NA92 274 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 AAMDCQ9H7C9 122 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 OOSP1A8MZH6 123 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 GP9P14770 177 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
VPS11-208ENST00000621676 TEX38Q6PEX7 206 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 METTL26Q96S19 204 aa8.11□□□□□ -1.11
VPS11-208ENST00000621676 SERTM2A0A1B0GWG4 89 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 FSTL3O95633 263 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 EBI3Q14213 229 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 C10orf91Q5T1B1 145 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 KLHL30-AS1Q8NEE0 82 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 OR11H1Q8NG94 326 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 IGHV3OR16-12A0A075B7B8 117 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 RELQ04864 619 aaPredicted RBP8.1□□□□□ -1.11
VPS11-208ENST00000621676 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 SHANK2-AS3Q9BTD1 123 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 VPREB3Q9UKI3 123 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
VPS11-208ENST00000621676 LY6G6DO95868 133 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 TCRAP04437 139 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 HIST1H1EP10412 219 aaKnown RBP8.09□□□□□ -1.11
VPS11-208ENST00000621676 FABP4P15090 132 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 TCTAP57738 103 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 S100A12P80511 92 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
VPS11-208ENST00000621676 TRAV12-2A0A075B6T6 113 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 IGHV4OR15-8A0A075B7B6 117 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 A0A087WW49 117 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 DNAJC9-AS1A6NH13 148 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 LY86O95711 162 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 TOMM40O96008 361 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 TRGC1P0CF51 173 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 RAB5BP61020 215 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 NUDT10Q8NFP7 164 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 NUDT11Q96G61 164 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 PRSS22Q9GZN4 317 aa8.09□□□□□ -1.11
VPS11-208ENST00000621676 MEGF9Q9H1U4 602 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms