RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CACNA1IQ9P0X4 2223 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 ICE1Q9Y2F5 2266 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 TICRRQ7Z2Z1 1910 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 MYOD1P15172 320 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 RALGAPA2Q2PPJ7 1873 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 C3orf56Q8N813 242 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 OR11H6Q8NGC7 330 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 A0A087WX48 190 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
COL4A6-210ENST00000621266 IGHG3P01860 377 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 NTF4P34130 210 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 NDPQ00604 133 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 PAX8Q06710 450 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 LY6G5BQ8NDX9 201 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 NTN5Q8WTR8 489 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-210ENST00000621266 SSC4DQ8WTU2 575 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 IGHV2OR16-5A0A0B4J2B6 119 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 J3QRE1 110 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 MST1LQ2TV78 715 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 LYNX1G3V0Z9 82 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 LYNX1P0DP58 116 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 NRN1LQ496H8 165 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 TRGV1A0A0A0MS02 117 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 NEGR1Q7Z3B1 354 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 ZIC4Q8N9L1 334 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 C1orf162Q8NEQ5 155 aaPredicted RBP8.07□□□□□ -1.12
COL4A6-210ENST00000621266 TP53TG1Q9Y2A0 90 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 FRMPD3Q5JV73 1810 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 WIPF3A6NGB9 483 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 FAM90A9PA6NNJ1 464 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 WBP1Q96G27 269 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 MRPS18CQ9Y3D5 142 aaKnown RBP8.07□□□□□ -1.12
COL4A6-210ENST00000621266 ABCA7Q8IZY2 2146 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 THSD7BQ9C0I4 1608 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 SAP30O75446 220 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 IGHG4P01861 327 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 PFN2P35080 140 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 FGFBP3Q8TAT2 258 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 MSRB2Q9Y3D2 182 aa8.07□□□□□ -1.12
COL4A6-210ENST00000621266 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
COL4A6-210ENST00000621266 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
COL4A6-210ENST00000621266 SPRR3Q9UBC9 169 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 ZFP36L1Q07352 338 aaKnown RBP8.06□□□□□ -1.12
COL4A6-210ENST00000621266 LINC00114Q6XXX2 140 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 FLVCR1-AS1Q8TAF5 88 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 LCTP09848 1927 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 IGKV1-5P01602 117 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 VDAC2P45880 294 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-210ENST00000621266 LHFPL1Q86WI0 220 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 MAPK1IP1LQ8NDC0 245 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 TMEM133Q9H2Q1 129 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 CRLF1O75462 422 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 SH2D6Q7Z4S9 175 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 IGHV2-5P01817 119 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 HLA-DRB4P13762 266 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 IGHV1-2P23083 117 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 FOXG1P55316 489 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-210ENST00000621266 SPSB3Q6PJ21 355 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 DTX2Q86UW9 622 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 HLA-DRB4X5D2U9 266 aa8.06□□□□□ -1.12
COL4A6-210ENST00000621266 PRR30Q53SZ7 412 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-210ENST00000621266 CACNA1DQ01668 2161 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 hADV29S1A0JD25 119 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 TIMM23O14925 209 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 NMSQ5H8A3 153 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 VWC2Q2TAL6 325 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 FBLN5Q9UBX5 448 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 EP300Q09472 2414 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-210ENST00000621266 IL18BPO95998 194 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 TMEM14EPQ6UXP3 125 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 ZCCHC24Q8N2G6 241 aaKnown RBP8.05□□□□□ -1.12
COL4A6-210ENST00000621266 PFN1P07737 140 aaKnown RBP8.05□□□□□ -1.12
COL4A6-210ENST00000621266 ASPHD1Q5U4P2 390 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 Q86TA4 180 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 NEU4Q8WWR8 484 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-210ENST00000621266 CYYR1Q96J86 154 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 LIME1Q9H400 295 aa8.05□□□□□ -1.12
COL4A6-210ENST00000621266 CNOT1A5YKK6 2376 aaKnown RBP8.05□□□□□ -1.12
COL4A6-210ENST00000621266 IGKV1-12A0A0C4DH73 117 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 IGKV1D-12P01611 117 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 FAM90A1Q86YD7 464 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 TRAV26-2A0A0B4J265 109 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 PINLYPA6NC86 204 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 BRK1Q8WUW1 75 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 J3KT08 172 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 NTN3O00634 580 aaPredicted RBP8.04□□□□□ -1.12
COL4A6-210ENST00000621266 NBL1P41271 181 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 MMP23AO75900 390 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 C12orf74Q32Q52 190 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 LINC00205P59089 165 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 GFRA4Q9GZZ7 299 aa8.04□□□□□ -1.12
COL4A6-210ENST00000621266 TEX48A0A1B0GUV7 120 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 IL17RELQ6ZVW7 336 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 RNASE8Q8TDE3 154 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms